RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 TRBV12-3P01733 135 aa15.84■□□□□ 0.13
TRAPPC3-208ENST00000616074 APELAP0DMC3 54 aa15.84■□□□□ 0.13
TRAPPC3-208ENST00000616074 DYRK1AQ13627 763 aa15.84■□□□□ 0.13
TRAPPC3-208ENST00000616074 ZNF343Q6P1L6 599 aa15.84■□□□□ 0.13
TRAPPC3-208ENST00000616074 COA4Q9NYJ1 87 aa15.84■□□□□ 0.13
TRAPPC3-208ENST00000616074 PEF1Q9UBV8 284 aaKnown RBP15.84■□□□□ 0.13
TRAPPC3-208ENST00000616074 RBMXL2O75526 392 aaKnown RBP15.83■□□□□ 0.12
TRAPPC3-208ENST00000616074 AADACP22760 399 aa15.83■□□□□ 0.12
TRAPPC3-208ENST00000616074 MAP2K4P45985 399 aa15.83■□□□□ 0.12
TRAPPC3-208ENST00000616074 CBX3Q13185 183 aa15.83■□□□□ 0.12
TRAPPC3-208ENST00000616074 PHB2Q99623 299 aa15.83■□□□□ 0.12
TRAPPC3-208ENST00000616074 MGLLQ99685 303 aa15.83■□□□□ 0.12
TRAPPC3-208ENST00000616074 CCDC90BQ9GZT6 254 aa15.83■□□□□ 0.12
TRAPPC3-208ENST00000616074 ZNF230Q9UIE0 474 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC3-208ENST00000616074 TNCP24821 2201 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 LCE6AA0A183 80 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 ANKRD65E5RJM6 399 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 H0Y980 276 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 MFNGO00587 321 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 DIRAS3O95661 229 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 GNB3P16520 340 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 RANBP1P43487 201 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 PSMD7P51665 324 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 TAGLNQ01995 201 aaKnown RBP15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 RTL8BQ17RB0 113 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 OR10R2Q8NGX6 335 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 NRG4Q8WWG1 115 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 ISOC1Q96CN7 298 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 THAP7Q9BT49 309 aaPredicted RBP15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 ACOT13Q9NPJ3 140 aa15.82■□□□□ 0.12
TRAPPC3-208ENST00000616074 A0A075B6Q4 140 aa15.81■□□□□ 0.12
TRAPPC3-208ENST00000616074 MSGN1A6NI15 193 aa15.81■□□□□ 0.12
TRAPPC3-208ENST00000616074 CSN3P07498 182 aa15.81■□□□□ 0.12
TRAPPC3-208ENST00000616074 OR10A3P58181 314 aa15.81■□□□□ 0.12
TRAPPC3-208ENST00000616074 PRSS48Q7RTY5 328 aa15.81■□□□□ 0.12
TRAPPC3-208ENST00000616074 ADAD2Q8NCV1 583 aaKnown RBP15.81■□□□□ 0.12
TRAPPC3-208ENST00000616074 DDB2Q92466 427 aa15.81■□□□□ 0.12
TRAPPC3-208ENST00000616074 USMG5Q96IX5 58 aa15.81■□□□□ 0.12
TRAPPC3-208ENST00000616074 SPATA25Q9BR10 227 aa15.81■□□□□ 0.12
TRAPPC3-208ENST00000616074 RBM7Q9Y580 266 aaKnown RBP15.81■□□□□ 0.12
TRAPPC3-208ENST00000616074 HYDINQ4G0P3 5121 aa15.81■□□□□ 0.12
TRAPPC3-208ENST00000616074 SHISA3A0PJX4 238 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 LINC00473A8K010 186 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 RAB27BO00194 218 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 RRASP10301 218 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 HIST1H1DP16402 221 aaKnown RBP15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 CRHBPP24387 322 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 GADD45AP24522 165 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 DUTP33316 252 aaKnown RBP15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 UBE2KP61086 200 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 TNXAQ16473 311 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 HAGHQ16775 308 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 RPEL1Q2QD12 228 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 VMA21Q3ZAQ7 101 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 IDO2Q6ZQW0 420 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 TEX45Q8NA69 505 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 GINS4Q9BRT9 223 aa15.8■□□□□ 0.12
TRAPPC3-208ENST00000616074 BIRC6Q9NR09 4857 aa15.79■□□□□ 0.12
TRAPPC3-208ENST00000616074 IZUMO1RA6ND01 250 aa15.79■□□□□ 0.12
TRAPPC3-208ENST00000616074 CRYZL1O95825 349 aa15.79■□□□□ 0.12
TRAPPC3-208ENST00000616074 OR9G9P0C7N8 305 aa15.79■□□□□ 0.12
TRAPPC3-208ENST00000616074 SSX1Q16384 188 aa15.79■□□□□ 0.12
TRAPPC3-208ENST00000616074 PRSS8Q16651 343 aa15.79■□□□□ 0.12
TRAPPC3-208ENST00000616074 TATDN3Q17R31 274 aa15.79■□□□□ 0.12
TRAPPC3-208ENST00000616074 LCN12Q6JVE5 192 aa15.79■□□□□ 0.12
TRAPPC3-208ENST00000616074 GTSCR1Q86UQ5 136 aa15.79■□□□□ 0.12
TRAPPC3-208ENST00000616074 H1FOOQ8IZA3 346 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC3-208ENST00000616074 SRSF12Q8WXF0 261 aaKnown RBP15.79■□□□□ 0.12
TRAPPC3-208ENST00000616074 SIGLEC8Q9NYZ4 499 aa15.79■□□□□ 0.12
TRAPPC3-208ENST00000616074 IGKV1D-8A0A087WSZ0 117 aa15.78■□□□□ 0.12
TRAPPC3-208ENST00000616074 A0A0B4J203 849 aa15.78■□□□□ 0.12
TRAPPC3-208ENST00000616074 IFITM5A6NNB3 132 aa15.78■□□□□ 0.12
TRAPPC3-208ENST00000616074 PDCD5O14737 125 aa15.78■□□□□ 0.12
TRAPPC3-208ENST00000616074 PRH1P02810 166 aa15.78■□□□□ 0.12
TRAPPC3-208ENST00000616074 Q8N402 240 aa15.78■□□□□ 0.12
TRAPPC3-208ENST00000616074 ACOT12Q8WYK0 555 aa15.78■□□□□ 0.12
TRAPPC3-208ENST00000616074 ADTRPQ96IZ2 230 aa15.78■□□□□ 0.12
TRAPPC3-208ENST00000616074 TRAV1-2A0A0B4J238 106 aa15.77■□□□□ 0.12
TRAPPC3-208ENST00000616074 MPPED1O15442 326 aa15.77■□□□□ 0.12
TRAPPC3-208ENST00000616074 OR2A4O95047 310 aa15.77■□□□□ 0.12
TRAPPC3-208ENST00000616074 RAB6AP20340 208 aa15.77■□□□□ 0.12
TRAPPC3-208ENST00000616074 ZNF45Q02386 682 aa15.77■□□□□ 0.12
TRAPPC3-208ENST00000616074 ARFRP1Q13795 201 aa15.77■□□□□ 0.12
TRAPPC3-208ENST00000616074 Q6ZS49 121 aa15.77■□□□□ 0.12
TRAPPC3-208ENST00000616074 OSR1Q8TAX0 266 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC3-208ENST00000616074 SNAPC3Q92966 411 aa15.77■□□□□ 0.12
TRAPPC3-208ENST00000616074 TUBA4BQ9H853 241 aa15.77■□□□□ 0.12
TRAPPC3-208ENST00000616074 AKIP1Q9NQ31 210 aa15.77■□□□□ 0.12
TRAPPC3-208ENST00000616074 ELF5Q9UKW6 265 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC3-208ENST00000616074 PLECQ15149 4684 aaKnown RBP15.77■□□□□ 0.11
TRAPPC3-208ENST00000616074 BMPR1BO00238 502 aa15.76■□□□□ 0.11
TRAPPC3-208ENST00000616074 TALDO1P37837 337 aa15.76■□□□□ 0.11
TRAPPC3-208ENST00000616074 MECP2P51608 486 aaKnown RBP15.76■□□□□ 0.11
TRAPPC3-208ENST00000616074 RHOGP84095 191 aa15.76■□□□□ 0.11
TRAPPC3-208ENST00000616074 EXOSC2Q13868 293 aaKnown RBP15.76■□□□□ 0.11
TRAPPC3-208ENST00000616074 TBCEQ15813 527 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC3-208ENST00000616074 ZNF430Q9H8G1 570 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC3-208ENST00000616074 FAM223BA6NKX1 122 aa15.75■□□□□ 0.11
TRAPPC3-208ENST00000616074 J3QRK9 145 aa15.75■□□□□ 0.11
TRAPPC3-208ENST00000616074 SAA1P0DJI8 122 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms