RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 LURAP1Q96LR2 239 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 GSN-AS1Q9NRJ2 163 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 BTBD17A6NE02 478 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 IFNL4K9M1U5 179 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 HSPB1P04792 205 aaKnown RBP11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 FABP1P07148 127 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 BCL2P10415 239 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 FOLR2P14207 255 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 AGAP20933 346 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 MDKP21741 143 aaPredicted RBP11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 RPS10P46783 165 aaKnown RBP11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 KLF3P57682 345 aaPredicted RBP11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 YPEL4Q96NS1 127 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 CLDN14O95500 239 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 FABP9Q0Z7S8 132 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 MSMO1Q15800 293 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 ZNF674Q2M3X9 581 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 Q6ZS92 163 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 CA5BP1Q8WTZ4 195 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 LRBAP50851 2863 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 MMP23AO75900 390 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 IFNA17P01571 189 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 HBE1P02100 147 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 S100A6P06703 90 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 LOXL3P58215 753 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 S100A12P80511 92 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 TMEM41BQ5BJD5 291 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 NCMAPQ5T1S8 102 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 C1orf185Q5T7R7 199 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 LHX4Q969G2 390 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 NIPSNAP3BQ9BS92 247 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 DSCAML1Q8TD84 2053 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 GNG10P50151 68 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 NKX6-1P78426 367 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 KHDC3LQ587J8 217 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 FAM216BQ8N7L0 139 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 ZBTB34Q8NCN2 500 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 TVP23CQ96ET8 276 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 CCL13Q99616 98 aa11.66□□□□□ -0.54
PCDHGA3-202ENST00000612467 SPTA1P02549 2419 aa11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 C5orf52A6NGY3 159 aa11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 PAX6P26367 422 aa11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 CCKARP32238 428 aa11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 FFAR4Q5NUL3 377 aa11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 TIMM23BQ5SRD1 257 aa11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 FAM90A1Q86YD7 464 aa11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 PSMG3Q9BT73 122 aaPredicted RBP11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 IFI27L2Q9H2X8 130 aa11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 TUBA4BQ9H853 241 aa11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 SLC39A9Q9NUM3 307 aa11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 TPRP12270 2363 aaKnown RBP11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 DYSFO75923 2080 aa11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 ZZEF1O43149 2961 aa11.65□□□□□ -0.54
PCDHGA3-202ENST00000612467 C15orf62A8K5M9 175 aa11.65□□□□□ -0.55
PCDHGA3-202ENST00000612467 SOX15O60248 233 aa11.65□□□□□ -0.55
PCDHGA3-202ENST00000612467 GYPAP02724 150 aa11.65□□□□□ -0.55
PCDHGA3-202ENST00000612467 ELOBQ15370 118 aa11.65□□□□□ -0.55
PCDHGA3-202ENST00000612467 PRAMEF5Q5TYX0 476 aa11.65□□□□□ -0.55
PCDHGA3-202ENST00000612467 HEPN1Q6WQI6 88 aa11.65□□□□□ -0.55
PCDHGA3-202ENST00000612467 OR10P1Q8NGE3 313 aa11.65□□□□□ -0.55
PCDHGA3-202ENST00000612467 MBD3L1Q8WWY6 194 aa11.65□□□□□ -0.55
PCDHGA3-202ENST00000612467 CSMD1Q96PZ7 3565 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 SMCO3A2RU48 225 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 RAB29O14966 203 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 RD3LP0DJH9 198 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 CCL8P80075 99 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 ABHD12Q8N2K0 398 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 ZNF561Q8N587 486 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 GCM1Q9NP62 436 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 CALYQ9NYX4 217 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 RRHO14718 337 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 MGST3O14880 152 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 OPN1MWP04001 364 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 OR8U8P0C7N1 319 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 OPN1MW2P0DN77 364 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 OPN1MW3P0DN78 364 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 GLRXP35754 106 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 CLEC12BQ2HXU8 276 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 C17orf58Q2M2W7 97 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 DPPA3Q6W0C5 159 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 OR10G4Q8NGN3 311 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 OR10G9Q8NGN4 311 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 OR10G7Q8NGN6 311 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 RPUSD4Q96CM3 377 aaKnown RBP11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 SNX22Q96L94 193 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 HSD17B10Q99714 261 aaKnown RBP11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 TOLLIPQ9H0E2 274 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 DCHS2Q6V1P9 2916 aa11.64□□□□□ -0.55
PCDHGA3-202ENST00000612467 TRAV1-1A0A0B4J248 108 aa11.63□□□□□ -0.55
PCDHGA3-202ENST00000612467 TRAV38-1A0A0B4J264 116 aa11.63□□□□□ -0.55
PCDHGA3-202ENST00000612467 A0A1B0GWJ7 208 aa11.63□□□□□ -0.55
PCDHGA3-202ENST00000612467 IGHV1-46P01743 117 aa11.63□□□□□ -0.55
PCDHGA3-202ENST00000612467 CD81P60033 236 aa11.63□□□□□ -0.55
PCDHGA3-202ENST00000612467 HTD2P86397 168 aa11.63□□□□□ -0.55
PCDHGA3-202ENST00000612467 RNF212Q495C1 297 aa11.63□□□□□ -0.55
PCDHGA3-202ENST00000612467 PRR30Q53SZ7 412 aaPredicted RBP11.63□□□□□ -0.55
PCDHGA3-202ENST00000612467 CT45A1Q5HYN5 189 aa11.63□□□□□ -0.55
PCDHGA3-202ENST00000612467 TCF23Q7RTU1 214 aa11.63□□□□□ -0.55
PCDHGA3-202ENST00000612467 CISD2Q8N5K1 135 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms