RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 RPS16P62249 146 aaKnown RBP11□□□□□ -0.65
RNF40-212ENST00000602784 RPL30P62888 115 aaKnown RBP11□□□□□ -0.65
RNF40-212ENST00000602784 ZNF45Q02386 682 aa11□□□□□ -0.65
RNF40-212ENST00000602784 GDPD1Q8N9F7 314 aa11□□□□□ -0.65
RNF40-212ENST00000602784 OR4D10Q8NGI6 311 aa11□□□□□ -0.65
RNF40-212ENST00000602784 TERB2Q8NHR7 220 aa11□□□□□ -0.65
RNF40-212ENST00000602784 OSR1Q8TAX0 266 aaPredicted RBP11□□□□□ -0.65
RNF40-212ENST00000602784 WFDC12Q8WWY7 111 aa11□□□□□ -0.65
RNF40-212ENST00000602784 TRIM63Q969Q1 353 aa11□□□□□ -0.65
RNF40-212ENST00000602784 RBMXL1Q96E39 390 aaKnown RBP11□□□□□ -0.65
RNF40-212ENST00000602784 RSRP1Q9BUV0 290 aa11□□□□□ -0.65
RNF40-212ENST00000602784 WNT10AQ9GZT5 417 aa11□□□□□ -0.65
RNF40-212ENST00000602784 FXYD6Q9H0Q3 95 aa11□□□□□ -0.65
RNF40-212ENST00000602784 DISC1C4P0D8 188 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 GPR31O00270 319 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 RBFOX2O43251 390 aaKnown RBP eCLIP10.99□□□□□ -0.65
RNF40-212ENST00000602784 KCNAB3O43448 404 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 HLA-DRB1P01911 266 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 ZNF735P0CB33 412 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 S100GP29377 79 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 CATR1Q13166 79 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 PSG5Q15238 335 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 ARSJQ5FYB0 599 aaPredicted RBP10.99□□□□□ -0.65
RNF40-212ENST00000602784 C9orf152Q5JTZ5 239 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 LIN54Q6MZP7 749 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 SLC35E3Q7Z769 313 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 SLC38A6Q8IZM9 456 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 CD300LFQ8TDQ1 290 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 TCTEX1D2Q8WW35 142 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 SRRQ9GZT4 340 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 ZNF580Q9UK33 172 aa10.99□□□□□ -0.65
RNF40-212ENST00000602784 SH2D7A6NKC9 451 aaPredicted RBP10.98□□□□□ -0.65
RNF40-212ENST00000602784 SHOXO15266 292 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 FCGR3BO75015 233 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 PGLYRP1O75594 196 aaPredicted RBP10.98□□□□□ -0.65
RNF40-212ENST00000602784 CRYZL1O95825 349 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 IGLV2-23P01705 113 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 ECI1P42126 302 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 BRWD1-AS2P59051 145 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 SHISA2Q6UWI4 295 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 TCTEX1D1Q8N7M0 179 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 OR4C16Q8NGL9 310 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 OR4S2Q8NH73 311 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 WIPF2Q8TF74 440 aaPredicted RBP10.98□□□□□ -0.65
RNF40-212ENST00000602784 ZNF486Q96H40 463 aaPredicted RBP10.98□□□□□ -0.65
RNF40-212ENST00000602784 HARBI1Q96MB7 349 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 PRRT1Q99946 306 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 SLC2A8Q9NY64 477 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 PTTG2Q9NZH5 202 aa10.98□□□□□ -0.65
RNF40-212ENST00000602784 SRRM4A7MD48 611 aaKnown RBP10.97□□□□□ -0.65
RNF40-212ENST00000602784 HAX1O00165 279 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 AP4M1O00189 453 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 TNFSF12O43508 249 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 PEX14O75381 377 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 CRYGBP07316 175 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 FAUP35544 74 aaKnown RBP10.97□□□□□ -0.65
RNF40-212ENST00000602784 UBE2KP61086 200 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 KLF9Q13886 244 aaPredicted RBP10.97□□□□□ -0.65
RNF40-212ENST00000602784 SURF2Q15527 256 aaPredicted RBP10.97□□□□□ -0.65
RNF40-212ENST00000602784 FOXRED2Q8IWF2 684 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 TOMM5Q8N4H5 51 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 KLHDC1Q8N7A1 406 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 TEX45Q8NA69 505 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 POC5Q8NA72 575 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 ZFAND1Q8TCF1 268 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 CHPT1Q8WUD6 406 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 GPHA2Q96T91 129 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 CITED1Q99966 193 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 AIFM2Q9BRQ8 373 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 FBXL15Q9H469 300 aa10.97□□□□□ -0.65
RNF40-212ENST00000602784 FAM212BQ9NTI7 297 aaPredicted RBP10.97□□□□□ -0.65
RNF40-212ENST00000602784 METTL1Q9UBP6 276 aaKnown RBP10.97□□□□□ -0.65
RNF40-212ENST00000602784 SLC25A17O43808 307 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 IGF1P05019 195 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 VSIG10L2P0DP72 767 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 RND3P61587 244 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 PLGLAQ15195 96 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 TMEM95Q3KNT9 176 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 VMA21Q3ZAQ7 101 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 SCGB2B2Q4G0G5 96 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 ZNF562Q6V9R5 426 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 PPP1R27Q86WC6 154 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 SPAG16Q8N0X2 631 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 HSPB9Q9BQS6 159 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 GON7Q9BXV9 100 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 OR51J1Q9H342 316 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 AKIP1Q9NQ31 210 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 SCP2D1Q9UJQ7 156 aa10.96□□□□□ -0.65
RNF40-212ENST00000602784 IGHV7-81A0A0B4J1V7 117 aa10.95□□□□□ -0.66
RNF40-212ENST00000602784 LINC01548A6NM66 108 aa10.95□□□□□ -0.66
RNF40-212ENST00000602784 FCN1O00602 326 aa10.95□□□□□ -0.66
RNF40-212ENST00000602784 HPRT1P00492 218 aa10.95□□□□□ -0.66
RNF40-212ENST00000602784 HRASP01112 189 aa10.95□□□□□ -0.66
RNF40-212ENST00000602784 RLN1P04808 185 aa10.95□□□□□ -0.66
RNF40-212ENST00000602784 PGAM2P15259 253 aa10.95□□□□□ -0.66
RNF40-212ENST00000602784 F2RP25116 425 aa10.95□□□□□ -0.66
RNF40-212ENST00000602784 KRTAP10-3P60369 221 aa10.95□□□□□ -0.66
RNF40-212ENST00000602784 PHLDA2Q53GA4 152 aa10.95□□□□□ -0.66
RNF40-212ENST00000602784 OR2B11Q5JQS5 317 aa10.95□□□□□ -0.66
RNF40-212ENST00000602784 FAAP20Q6NZ36 180 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms