RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 NKX1-2Q9UD57 310 aaPredicted RBP13.69□□□□□ -0.22
CHMP2A-208ENST00000601220 RAB22AQ9UL26 194 aa13.69□□□□□ -0.22
CHMP2A-208ENST00000601220 AADACP22760 399 aa13.68□□□□□ -0.22
CHMP2A-208ENST00000601220 TAGLNQ01995 201 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-208ENST00000601220 ADAD2Q8NCV1 583 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-208ENST00000601220 OR10J5Q8NHC4 309 aa13.68□□□□□ -0.22
CHMP2A-208ENST00000601220 NRG4Q8WWG1 115 aa13.68□□□□□ -0.22
CHMP2A-208ENST00000601220 RAB3CQ96E17 227 aa13.68□□□□□ -0.22
CHMP2A-208ENST00000601220 USMG5Q96IX5 58 aa13.68□□□□□ -0.22
CHMP2A-208ENST00000601220 VCXQ9H320 206 aa13.68□□□□□ -0.22
CHMP2A-208ENST00000601220 PALMDQ9NP74 551 aa13.68□□□□□ -0.22
CHMP2A-208ENST00000601220 ZNF230Q9UIE0 474 aaPredicted RBP13.68□□□□□ -0.22
CHMP2A-208ENST00000601220 TPRKBQ9Y3C4 175 aa13.68□□□□□ -0.22
CHMP2A-208ENST00000601220 BIRC6Q9NR09 4857 aa13.68□□□□□ -0.22
CHMP2A-208ENST00000601220 SHISA3A0PJX4 238 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 IZUMO1RA6ND01 250 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 MSGN1A6NI15 193 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 H0Y980 276 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 RAB27BO00194 218 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 MFNGO00587 321 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 RGS10O43665 173 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 AQP4P55087 323 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 PRSS8Q16651 343 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 HES5Q5TA89 166 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 TEX45Q8NA69 505 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 MAFIPQ8WZ33 124 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 MGLLQ99685 303 aa13.67□□□□□ -0.22
CHMP2A-208ENST00000601220 IGKV1D-8A0A087WSZ0 117 aa13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 LINC00473A8K010 186 aa13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 SHOXO15266 292 aa13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 APELAP0DMC3 54 aa13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 GNB3P16520 340 aa13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 CRHBPP24387 322 aa13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 DUTP33316 252 aaKnown RBP13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 MAP2K4P45985 399 aa13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 PSMD7P51665 324 aa13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 UBE2KP61086 200 aa13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 ADAMTSL5Q6ZMM2 481 aa13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 OR10R2Q8NGX6 335 aa13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 ACOT13Q9NPJ3 140 aa13.66□□□□□ -0.22
CHMP2A-208ENST00000601220 TRBV9A0A0B4J1U6 114 aa13.65□□□□□ -0.22
CHMP2A-208ENST00000601220 RRASP10301 218 aa13.65□□□□□ -0.22
CHMP2A-208ENST00000601220 OR10A3P58181 314 aa13.65□□□□□ -0.22
CHMP2A-208ENST00000601220 ZNF45Q02386 682 aa13.65□□□□□ -0.22
CHMP2A-208ENST00000601220 SSX1Q16384 188 aa13.65□□□□□ -0.22
CHMP2A-208ENST00000601220 LINC00322Q6ZN03 302 aaPredicted RBP13.65□□□□□ -0.22
CHMP2A-208ENST00000601220 Q6ZS49 121 aa13.65□□□□□ -0.22
CHMP2A-208ENST00000601220 PRSS48Q7RTY5 328 aa13.65□□□□□ -0.22
CHMP2A-208ENST00000601220 H1FOOQ8IZA3 346 aaPredicted RBP13.65□□□□□ -0.22
CHMP2A-208ENST00000601220 ISOC1Q96CN7 298 aa13.65□□□□□ -0.22
CHMP2A-208ENST00000601220 SPATA25Q9BR10 227 aa13.65□□□□□ -0.22
CHMP2A-208ENST00000601220 COA4Q9NYJ1 87 aa13.65□□□□□ -0.22
CHMP2A-208ENST00000601220 TRAV1-2A0A0B4J238 106 aa13.64□□□□□ -0.23
CHMP2A-208ENST00000601220 OR2A4O95047 310 aa13.64□□□□□ -0.23
CHMP2A-208ENST00000601220 OR9G9P0C7N8 305 aa13.64□□□□□ -0.23
CHMP2A-208ENST00000601220 HIST1H1DP16402 221 aaKnown RBP13.64□□□□□ -0.23
CHMP2A-208ENST00000601220 RANBP1P43487 201 aa13.64□□□□□ -0.23
CHMP2A-208ENST00000601220 RTL8BQ17RB0 113 aa13.64□□□□□ -0.23
CHMP2A-208ENST00000601220 IDO2Q6ZQW0 420 aa13.64□□□□□ -0.23
CHMP2A-208ENST00000601220 Q8N402 240 aa13.64□□□□□ -0.23
CHMP2A-208ENST00000601220 AKIP1Q9NQ31 210 aa13.64□□□□□ -0.23
CHMP2A-208ENST00000601220 DMRT1Q9Y5R6 373 aa13.64□□□□□ -0.23
CHMP2A-208ENST00000601220 HYDINQ4G0P3 5121 aa13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 IFITM5A6NNB3 132 aa13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 ANKRD65E5RJM6 399 aa13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 BMPR1BO00238 502 aa13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 PRH1P02810 166 aa13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 RAB6AP20340 208 aa13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 MRPS15P82914 257 aaKnown RBP13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 TNXAQ16473 311 aa13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 RPEL1Q2QD12 228 aa13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 SRSF12Q8WXF0 261 aaKnown RBP13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 SNAPC3Q92966 411 aa13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 ADTRPQ96IZ2 230 aa13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 ELF5Q9UKW6 265 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-208ENST00000601220 A0A0B4J203 849 aa13.62□□□□□ -0.23
CHMP2A-208ENST00000601220 CRYZL1O95825 349 aa13.62□□□□□ -0.23
CHMP2A-208ENST00000601220 RHOGP84095 191 aa13.62□□□□□ -0.23
CHMP2A-208ENST00000601220 CBX3Q13185 183 aa13.62□□□□□ -0.23
CHMP2A-208ENST00000601220 TATDN3Q17R31 274 aa13.62□□□□□ -0.23
CHMP2A-208ENST00000601220 VMA21Q3ZAQ7 101 aa13.62□□□□□ -0.23
CHMP2A-208ENST00000601220 LCN12Q6JVE5 192 aa13.62□□□□□ -0.23
CHMP2A-208ENST00000601220 NR2C2APQ86WQ0 139 aa13.62□□□□□ -0.23
CHMP2A-208ENST00000601220 OSR1Q8TAX0 266 aaPredicted RBP13.62□□□□□ -0.23
CHMP2A-208ENST00000601220 PHB2Q99623 299 aa13.62□□□□□ -0.23
CHMP2A-208ENST00000601220 CCDC90BQ9GZT6 254 aa13.62□□□□□ -0.23
CHMP2A-208ENST00000601220 ZNF430Q9H8G1 570 aaPredicted RBP13.62□□□□□ -0.23
CHMP2A-208ENST00000601220 A0A075B6Q4 140 aa13.61□□□□□ -0.23
CHMP2A-208ENST00000601220 ZNF785A8K8V0 405 aa13.61□□□□□ -0.23
CHMP2A-208ENST00000601220 IGLV2-14P01704 120 aa13.61□□□□□ -0.23
CHMP2A-208ENST00000601220 GADD45AP24522 165 aa13.61□□□□□ -0.23
CHMP2A-208ENST00000601220 GTSCR1Q86UQ5 136 aa13.61□□□□□ -0.23
CHMP2A-208ENST00000601220 TTC9CQ8N5M4 171 aa13.61□□□□□ -0.23
CHMP2A-208ENST00000601220 OR2K2Q8NGT1 345 aa13.61□□□□□ -0.23
CHMP2A-208ENST00000601220 GINS4Q9BRT9 223 aa13.61□□□□□ -0.23
CHMP2A-208ENST00000601220 PLECQ15149 4684 aaKnown RBP13.61□□□□□ -0.23
CHMP2A-208ENST00000601220 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.6□□□□□ -0.23
CHMP2A-208ENST00000601220 FAM223BA6NKX1 122 aa13.6□□□□□ -0.23
CHMP2A-208ENST00000601220 PDCD5O14737 125 aa13.6□□□□□ -0.23
CHMP2A-208ENST00000601220 SAA1P0DJI8 122 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms