RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 DUTP33316 252 aaKnown RBP17.79■□□□□ 0.44
SSBP4-205ENST00000598159 SCAND1P57086 179 aa17.79■□□□□ 0.44
SSBP4-205ENST00000598159 TPPP2P59282 170 aa17.79■□□□□ 0.44
SSBP4-205ENST00000598159 GRPEL2Q8TAA5 225 aa17.79■□□□□ 0.44
SSBP4-205ENST00000598159 DDB2Q92466 427 aa17.79■□□□□ 0.44
SSBP4-205ENST00000598159 DLX4Q92988 240 aaPredicted RBP17.79■□□□□ 0.44
SSBP4-205ENST00000598159 C5orf30Q96GV9 206 aa17.79■□□□□ 0.44
SSBP4-205ENST00000598159 ZNF355PQ9NSJ1 428 aa17.79■□□□□ 0.44
SSBP4-205ENST00000598159 SRRM4A7MD48 611 aaKnown RBP17.78■□□□□ 0.44
SSBP4-205ENST00000598159 TRGV3P03979 118 aa17.78■□□□□ 0.44
SSBP4-205ENST00000598159 PJVKQ0ZLH3 352 aa17.78■□□□□ 0.44
SSBP4-205ENST00000598159 CNIH2Q6PI25 160 aa17.78■□□□□ 0.44
SSBP4-205ENST00000598159 TEX45Q8NA69 505 aa17.78■□□□□ 0.44
SSBP4-205ENST00000598159 PRR25Q96S07 402 aa17.78■□□□□ 0.44
SSBP4-205ENST00000598159 ZNF256Q9Y2P7 627 aaPredicted RBP17.78■□□□□ 0.44
SSBP4-205ENST00000598159 OR2W1Q9Y3N9 320 aa17.78■□□□□ 0.44
SSBP4-205ENST00000598159 IGHV4OR15-8A0A075B7B6 117 aa17.77■□□□□ 0.44
SSBP4-205ENST00000598159 A0A087WW49 117 aa17.77■□□□□ 0.44
SSBP4-205ENST00000598159 SLC22A5O76082 557 aa17.77■□□□□ 0.44
SSBP4-205ENST00000598159 SLURP1P55000 103 aa17.77■□□□□ 0.44
SSBP4-205ENST00000598159 GNG2P59768 71 aa17.77■□□□□ 0.44
SSBP4-205ENST00000598159 VMA21Q3ZAQ7 101 aa17.77■□□□□ 0.44
SSBP4-205ENST00000598159 ZNF645Q8N7E2 425 aa17.77■□□□□ 0.44
SSBP4-205ENST00000598159 OR5T1Q8NG75 326 aa17.77■□□□□ 0.44
SSBP4-205ENST00000598159 LGALS14Q8TCE9 139 aa17.77■□□□□ 0.44
SSBP4-205ENST00000598159 SORL1Q92673 2214 aa17.76■□□□□ 0.43
SSBP4-205ENST00000598159 A0A0G2JLM5 398 aa17.76■□□□□ 0.43
SSBP4-205ENST00000598159 TMEM235A6NFC5 223 aa17.76■□□□□ 0.43
SSBP4-205ENST00000598159 IGHV3-11P01762 117 aa17.76■□□□□ 0.43
SSBP4-205ENST00000598159 HLA-DQB1P01920 261 aa17.76■□□□□ 0.43
SSBP4-205ENST00000598159 CD36P16671 472 aa17.76■□□□□ 0.43
SSBP4-205ENST00000598159 SSBP2P81877 361 aaPredicted RBP17.76■□□□□ 0.43
SSBP4-205ENST00000598159 MXD1Q05195 221 aa17.76■□□□□ 0.43
SSBP4-205ENST00000598159 KCTD21Q4G0X4 260 aa17.76■□□□□ 0.43
SSBP4-205ENST00000598159 POC5Q8NA72 575 aa17.76■□□□□ 0.43
SSBP4-205ENST00000598159 OSR1Q8TAX0 266 aaPredicted RBP17.76■□□□□ 0.43
SSBP4-205ENST00000598159 NUDCD2Q8WVJ2 157 aa17.76■□□□□ 0.43
SSBP4-205ENST00000598159 RHBDL2Q9NX52 303 aa17.76■□□□□ 0.43
SSBP4-205ENST00000598159 ETV7Q9Y603 341 aa17.76■□□□□ 0.43
SSBP4-205ENST00000598159 LOC100506127A0A0U1RQW1 187 aa17.75■□□□□ 0.43
SSBP4-205ENST00000598159 LINC00473A8K010 186 aa17.75■□□□□ 0.43
SSBP4-205ENST00000598159 BRI3O95415 125 aa17.75■□□□□ 0.43
SSBP4-205ENST00000598159 CLEC2LP0C7M8 214 aa17.75■□□□□ 0.43
SSBP4-205ENST00000598159 NHLRC4P0CG21 123 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-205ENST00000598159 NFYAP23511 347 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-205ENST00000598159 UBE2KP61086 200 aa17.75■□□□□ 0.43
SSBP4-205ENST00000598159 ACSM6Q6P461 480 aa17.75■□□□□ 0.43
SSBP4-205ENST00000598159 RNF167Q9H6Y7 350 aa17.75■□□□□ 0.43
SSBP4-205ENST00000598159 C13orf42A0A1B0GVH6 325 aa17.74■□□□□ 0.43
SSBP4-205ENST00000598159 J3QRK9 145 aa17.74■□□□□ 0.43
SSBP4-205ENST00000598159 TMEM127O75204 238 aa17.74■□□□□ 0.43
SSBP4-205ENST00000598159 SAP30O75446 220 aa17.74■□□□□ 0.43
SSBP4-205ENST00000598159 CRYZL1O95825 349 aa17.74■□□□□ 0.43
SSBP4-205ENST00000598159 NEDD8Q15843 81 aa17.74■□□□□ 0.43
SSBP4-205ENST00000598159 IDNKQ5T6J7 187 aa17.74■□□□□ 0.43
SSBP4-205ENST00000598159 C11orf87Q6NUJ2 197 aa17.74■□□□□ 0.43
SSBP4-205ENST00000598159 RANGRFQ9HD47 186 aaPredicted RBP17.74■□□□□ 0.43
SSBP4-205ENST00000598159 ANXA10Q9UJ72 324 aa17.74■□□□□ 0.43
SSBP4-205ENST00000598159 PRELID3BQ9Y3B1 194 aa17.74■□□□□ 0.43
SSBP4-205ENST00000598159 A0A0A6YYH2 397 aa17.73■□□□□ 0.43
SSBP4-205ENST00000598159 A6NJ64 397 aa17.73■□□□□ 0.43
SSBP4-205ENST00000598159 SSX5O60225 188 aa17.73■□□□□ 0.43
SSBP4-205ENST00000598159 MRGPRG-AS1Q2M3A8 158 aa17.73■□□□□ 0.43
SSBP4-205ENST00000598159 RBMX2Q9Y388 322 aaKnown RBP17.73■□□□□ 0.43
SSBP4-205ENST00000598159 MSGN1A6NI15 193 aa17.72■□□□□ 0.43
SSBP4-205ENST00000598159 LY86O95711 162 aa17.72■□□□□ 0.43
SSBP4-205ENST00000598159 AADACP22760 399 aa17.72■□□□□ 0.43
SSBP4-205ENST00000598159 PRSS8Q16651 343 aa17.72■□□□□ 0.43
SSBP4-205ENST00000598159 OR5H6Q8NGV6 325 aa17.72■□□□□ 0.43
SSBP4-205ENST00000598159 PHB2Q99623 299 aa17.72■□□□□ 0.43
SSBP4-205ENST00000598159 DCUN1D5Q9BTE7 237 aa17.72■□□□□ 0.43
SSBP4-205ENST00000598159 TINAGL1Q9GZM7 467 aaPredicted RBP17.72■□□□□ 0.43
SSBP4-205ENST00000598159 TNCP24821 2201 aa17.72■□□□□ 0.43
SSBP4-205ENST00000598159 TRAV18A0A075B6X5 111 aa17.71■□□□□ 0.43
SSBP4-205ENST00000598159 FCGR3BO75015 233 aa17.71■□□□□ 0.43
SSBP4-205ENST00000598159 ZP3P21754 424 aa17.71■□□□□ 0.43
SSBP4-205ENST00000598159 OR6Q1Q8NGQ2 317 aa17.71■□□□□ 0.43
SSBP4-205ENST00000598159 OR4C12Q96R67 309 aa17.71■□□□□ 0.43
SSBP4-205ENST00000598159 DIABLOQ9NR28 239 aa17.71■□□□□ 0.43
SSBP4-205ENST00000598159 MRPS7Q9Y2R9 242 aaKnown RBP17.71■□□□□ 0.43
SSBP4-205ENST00000598159 CREBL2O60519 120 aaPredicted RBP17.7■□□□□ 0.42
SSBP4-205ENST00000598159 TUSC2O75896 110 aa17.7■□□□□ 0.42
SSBP4-205ENST00000598159 IGLV2-14P01704 120 aa17.7■□□□□ 0.42
SSBP4-205ENST00000598159 TNXAQ16473 311 aa17.7■□□□□ 0.42
SSBP4-205ENST00000598159 TIMM50Q3ZCQ8 353 aa17.7■□□□□ 0.42
SSBP4-205ENST00000598159 KCTD9Q7L273 389 aa17.7■□□□□ 0.42
SSBP4-205ENST00000598159 OVCH2Q7RTZ1 564 aa17.7■□□□□ 0.42
SSBP4-205ENST00000598159 SLC25A38Q96DW6 304 aa17.7■□□□□ 0.42
SSBP4-205ENST00000598159 USMG5Q96IX5 58 aa17.7■□□□□ 0.42
SSBP4-205ENST00000598159 HSD17B10Q99714 261 aaKnown RBP17.7■□□□□ 0.42
SSBP4-205ENST00000598159 ELOVL1Q9BW60 279 aa17.7■□□□□ 0.42
SSBP4-205ENST00000598159 SPATA2Q9UM82 520 aa17.7■□□□□ 0.42
SSBP4-205ENST00000598159 IGKV1D-13A0A0B4J2D9 117 aa17.69■□□□□ 0.42
SSBP4-205ENST00000598159 ACTL6BO94805 426 aa17.69■□□□□ 0.42
SSBP4-205ENST00000598159 IGKV1-13P0DP09 117 aa17.69■□□□□ 0.42
SSBP4-205ENST00000598159 CDK10Q15131 360 aa17.69■□□□□ 0.42
SSBP4-205ENST00000598159 IDO2Q6ZQW0 420 aa17.69■□□□□ 0.42
SSBP4-205ENST00000598159 HOGA1Q86XE5 327 aa17.69■□□□□ 0.42
SSBP4-205ENST00000598159 CROCCP3Q8IVE0 287 aa17.69■□□□□ 0.42
SSBP4-205ENST00000598159 BEST4Q8NFU0 473 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms