RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 ZNF660Q6AZW8 331 aaPredicted RBP12.48□□□□□ -0.41
USHBP1-206ENST00000596436 BVESQ8NE79 360 aa12.48□□□□□ -0.41
USHBP1-206ENST00000596436 FBXL15Q9H469 300 aa12.48□□□□□ -0.41
USHBP1-206ENST00000596436 EHFQ9NZC4 300 aa12.48□□□□□ -0.41
USHBP1-206ENST00000596436 RSL24D1Q9UHA3 163 aaKnown RBP12.48□□□□□ -0.41
USHBP1-206ENST00000596436 RBMX2Q9Y388 322 aaKnown RBP12.48□□□□□ -0.41
USHBP1-206ENST00000596436 DNAH7Q8WXX0 4024 aa12.48□□□□□ -0.41
USHBP1-206ENST00000596436 SULT1C2O00338 296 aa12.47□□□□□ -0.41
USHBP1-206ENST00000596436 RBBP9O75884 186 aa12.47□□□□□ -0.41
USHBP1-206ENST00000596436 HLA-DMAP28067 261 aa12.47□□□□□ -0.41
USHBP1-206ENST00000596436 RPL30P62888 115 aaKnown RBP12.47□□□□□ -0.41
USHBP1-206ENST00000596436 DYRK1AQ13627 763 aa12.47□□□□□ -0.41
USHBP1-206ENST00000596436 OVCH2Q7RTZ1 564 aa12.47□□□□□ -0.41
USHBP1-206ENST00000596436 OR5H2Q8NGV7 314 aa12.47□□□□□ -0.41
USHBP1-206ENST00000596436 OR52I2Q8NH67 350 aa12.47□□□□□ -0.41
USHBP1-206ENST00000596436 C6orf62Q9GZU0 229 aaPredicted RBP12.47□□□□□ -0.41
USHBP1-206ENST00000596436 NXF2Q9GZY0 626 aaKnown RBP12.47□□□□□ -0.41
USHBP1-206ENST00000596436 CCL28Q9NRJ3 127 aa12.47□□□□□ -0.41
USHBP1-206ENST00000596436 ZFP57Q9NU63 452 aa12.47□□□□□ -0.41
USHBP1-206ENST00000596436 RRHO14718 337 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 HLA-DRB1P01911 266 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 NHLRC4P0CG21 123 aaPredicted RBP12.46□□□□□ -0.41
USHBP1-206ENST00000596436 RCVRNP35243 200 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 HRH1P35367 487 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 MYCNOSP40205 109 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 TAS2R46P59540 309 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 FXYD4P59646 89 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 PSG5Q15238 335 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 ZNF329Q86UD4 541 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 STPG2Q8N412 459 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 MCFD2Q8NI22 146 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 CHPT1Q8WUD6 406 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 SECTM1Q8WVN6 248 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 GIMAP1Q8WWP7 306 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 GPHA2Q96T91 129 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 DCUN1D5Q9BTE7 237 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 TPSG1Q9NRR2 321 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 KLK11Q9UBX7 282 aa12.46□□□□□ -0.41
USHBP1-206ENST00000596436 RYR2Q92736 4967 aa12.46□□□□□ -0.42
USHBP1-206ENST00000596436 IGHV7-81A0A0B4J1V7 117 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 TPPPO94811 219 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 IGLV2-23P01705 113 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 DGCR2P98153 550 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 NDPQ00604 133 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 DHRS11Q6UWP2 260 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 C18orf65Q6ZTR6 163 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 C8orf86Q6ZUL3 223 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 FOXRED2Q8IWF2 684 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 FLYWCH2Q96CP2 140 aaKnown RBP12.45□□□□□ -0.42
USHBP1-206ENST00000596436 ADTRPQ96IZ2 230 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 RNF5Q99942 180 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 ZNF2Q9BSG1 426 aaPredicted RBP12.45□□□□□ -0.42
USHBP1-206ENST00000596436 SLC5A7Q9GZV3 580 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 FXYD6Q9H0Q3 95 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 KIAA1456Q9P272 454 aa12.45□□□□□ -0.42
USHBP1-206ENST00000596436 ZMAT5Q9UDW3 170 aaKnown RBP12.45□□□□□ -0.42
USHBP1-206ENST00000596436 LSM4Q9Y4Z0 139 aaKnown RBP12.45□□□□□ -0.42
USHBP1-206ENST00000596436 ZNF701M0R085 212 aaPredicted RBP12.44□□□□□ -0.42
USHBP1-206ENST00000596436 AP4M1O00189 453 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 FCN1O00602 326 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 TNFSF12O43508 249 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 SLC22A5O76082 557 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 RPS16P62249 146 aaKnown RBP12.44□□□□□ -0.42
USHBP1-206ENST00000596436 TMEM177Q53S58 311 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 OR2B11Q5JQS5 317 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 LIN54Q6MZP7 749 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 KCTD9Q7L273 389 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 TMEM17Q86X19 198 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 COMMD1Q8N668 190 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 MOB3AQ96BX8 217 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 DIRAS2Q96HU8 199 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 HARBI1Q96MB7 349 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 TAS2R8Q9NYW2 309 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 METTL1Q9UBP6 276 aaKnown RBP12.44□□□□□ -0.42
USHBP1-206ENST00000596436 MTFP1Q9UDX5 166 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 FBXO7Q9Y3I1 522 aa12.44□□□□□ -0.42
USHBP1-206ENST00000596436 HUWE1Q7Z6Z7 4374 aaKnown RBP12.43□□□□□ -0.42
USHBP1-206ENST00000596436 SRRM4A7MD48 611 aaKnown RBP12.43□□□□□ -0.42
USHBP1-206ENST00000596436 M0QYG6 137 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 ATP6V0E1O15342 81 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 SLC25A17O43808 307 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 SPDEFO95238 335 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 CRYZL1O95825 349 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 IGF1P05019 195 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 TNFSF8P32971 234 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 BRWD1-AS2P59051 145 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 HERV-K104P61576 105 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 TAGLNQ01995 201 aaKnown RBP12.43□□□□□ -0.42
USHBP1-206ENST00000596436 CFHR3Q02985 330 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 MSMO1Q15800 293 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 RTL8BQ17RB0 113 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 ZNF818PQ6ZRF7 136 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 CLCC1Q96S66 551 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 TSNAXQ99598 290 aaKnown RBP12.43□□□□□ -0.42
USHBP1-206ENST00000596436 HSD17B10Q99714 261 aaKnown RBP12.43□□□□□ -0.42
USHBP1-206ENST00000596436 OR51J1Q9H342 316 aa12.43□□□□□ -0.42
USHBP1-206ENST00000596436 SACSQ9NZJ4 4579 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 GABARAPH6UMI1 98 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 RAMP3O60896 148 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 FCGR3BO75015 233 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms