RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 HARBI1Q96MB7 349 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 SLC5A7Q9GZV3 580 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 CCL28Q9NRJ3 127 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 MTFP1Q9UDX5 166 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 NBEAL1Q6ZS30 2694 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 CCDC160A6NGH7 325 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 FCN1O00602 326 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 SHOXO15266 292 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 CRYGBP07316 175 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 VDAC1P21796 283 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 HERV-K104P61576 105 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 CX3CL1P78423 397 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 ACTBL2Q562R1 376 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 VAX1Q5SQQ9 334 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 HIST2H2BDQ6DRA6 164 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 KCTD9Q7L273 389 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 MFSD4AQ8N468 514 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 RNF152Q8N8N0 203 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 OR52I2Q8NH67 350 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 MCFD2Q8NI22 146 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 FCAMRQ8WWV6 532 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 DIRAS2Q96HU8 199 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 ZNF2Q9BSG1 426 aaPredicted RBP14.34□□□□□ -0.11
ZNF558-204ENST00000596172 C6orf62Q9GZU0 229 aaPredicted RBP14.34□□□□□ -0.11
ZNF558-204ENST00000596172 ZFP57Q9NU63 452 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 KLK11Q9UBX7 282 aa14.34□□□□□ -0.11
ZNF558-204ENST00000596172 TET2Q6N021 2002 aaPredicted RBP14.33□□□□□ -0.12
ZNF558-204ENST00000596172 CMYA5Q8N3K9 4069 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 SRRM4A7MD48 611 aaKnown RBP14.33□□□□□ -0.12
ZNF558-204ENST00000596172 GABARAPH6UMI1 98 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 CTDSPLO15194 276 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 SLC25A17O43808 307 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 CRYZL1O95825 349 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 TSPAN15O95858 294 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 IGHG4P01861 327 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 GNRHRP30968 328 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 FXYD4P59646 89 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 SSBP1Q04837 148 aaKnown RBP14.33□□□□□ -0.12
ZNF558-204ENST00000596172 FOXE3Q13461 319 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 NSUN5P1Q3KNT7 163 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 PYHIN1Q6K0P9 492 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 PPP1R27Q86WC6 154 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 TEX45Q8NA69 505 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 A3GALT2U3KPV4 340 aa14.33□□□□□ -0.12
ZNF558-204ENST00000596172 ATP6V0E1O15342 81 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 FCGR3BO75015 233 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 ELANEP08246 267 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 TBPP20226 339 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 PPIFP30405 207 aaKnown RBP14.32□□□□□ -0.12
ZNF558-204ENST00000596172 KIR2DS2P43631 304 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 BRWD1-AS2P59051 145 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 UBE2KP61086 200 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 OR4F17Q8NGA8 305 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 OR4S2Q8NH73 311 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 TCTEX1D2Q8WW35 142 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 OR4F4Q96R69 305 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 SOSTQ9BQB4 213 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 PARP11Q9NR21 331 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 TAS2R8Q9NYW2 309 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 WNK1Q9H4A3 2382 aa14.32□□□□□ -0.12
ZNF558-204ENST00000596172 TRAV41A0A0B4J266 112 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 RBFOX2O43251 390 aaKnown RBP eCLIP14.31□□□□□ -0.12
ZNF558-204ENST00000596172 EGR2P11161 476 aaPredicted RBP14.31□□□□□ -0.12
ZNF558-204ENST00000596172 SLC6A1P30531 599 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 TNFSF8P32971 234 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 TSPAN5P62079 268 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 NDPQ00604 133 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 VMA21Q3ZAQ7 101 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 C19orf54Q5BKX5 351 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 ZNF818PQ6ZRF7 136 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 TMEM17Q86X19 198 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 TCTEX1D1Q8N7M0 179 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 MINDY2Q8NBR6 621 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 NDUFA13Q9P0J0 144 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 NUBP2Q9Y5Y2 271 aa14.31□□□□□ -0.12
ZNF558-204ENST00000596172 CA2P00918 260 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 PSMB8P28062 276 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 UCP3P55916 312 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 RPL23AP62750 156 aaKnown RBP14.3□□□□□ -0.12
ZNF558-204ENST00000596172 DGCR2P98153 550 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 TMEM267Q0VDI3 215 aaPredicted RBP14.3□□□□□ -0.12
ZNF558-204ENST00000596172 CATR1Q13166 79 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 AKIRIN2Q53H80 203 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 LPCAT3Q6P1A2 487 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 TMEM229BQ8NBD8 167 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 FAM110DQ8TAY7 271 aaPredicted RBP14.3□□□□□ -0.12
ZNF558-204ENST00000596172 SMIM4Q8WVI0 70 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 R3HDM4Q96D70 268 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 DGCR14Q96DF8 476 aaKnown RBP14.3□□□□□ -0.12
ZNF558-204ENST00000596172 CLCC1Q96S66 551 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 DCUN1D5Q9BTE7 237 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 TPSG1Q9NRR2 321 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 WSB1Q9Y6I7 421 aa14.3□□□□□ -0.12
ZNF558-204ENST00000596172 G3V318 75 aa14.29□□□□□ -0.12
ZNF558-204ENST00000596172 TNFSF12O43508 249 aa14.29□□□□□ -0.12
ZNF558-204ENST00000596172 IGLV1-40P01703 118 aa14.29□□□□□ -0.12
ZNF558-204ENST00000596172 CD74P04233 296 aa14.29□□□□□ -0.12
ZNF558-204ENST00000596172 CD3DP04234 171 aa14.29□□□□□ -0.12
ZNF558-204ENST00000596172 IL18Q14116 193 aa14.29□□□□□ -0.12
ZNF558-204ENST00000596172 MRGPRG-AS1Q2M3A8 158 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms