RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, human

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-218	ENST00000593053	INSL3	P51460	131 aa		10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	SSBP2	P81877	361 aa	Predicted RBP	10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	PJVK	Q0ZLH3	352 aa		10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	CBX3	Q13185	183 aa		10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	ARL6IP1	Q15041	203 aa		10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053		Q6ZS49	121 aa		10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	BVES	Q8NE79	360 aa		10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	ISOC1	Q96CN7	298 aa		10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	ST6GALNAC5	Q9BVH7	336 aa		10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	OR51E2	Q9H255	320 aa		10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	LSM4	Q9Y4Z0	139 aa	Known RBP	10.12	□□□□□ -0.79
PRKCSH-218	ENST00000593053	IGHV4OR15-8	A0A075B7B6	117 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053		A0A087WW49	117 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053		J3QRK9	145 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	SHOX	O15266	292 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	SAP30	O75446	220 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	LY86	O95711	162 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	TRGV3	P03979	118 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	CRYGB	P07316	175 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	TGFBR1	P36897	503 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	TAGLN	Q01995	201 aa	Known RBP	10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	RTL8B	Q17RB0	113 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	TMEM177	Q53S58	311 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	HACD4	Q5VWC8	232 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	SFXN4	Q6P4A7	337 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	TPRA1	Q86W33	373 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	OR5T1	Q8NG75	326 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	NUDCD2	Q8WVJ2	157 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	RHOV	Q96L33	236 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	CENPO	Q9BU64	300 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	SLA2	Q9H6Q3	261 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	VCX3A	Q9NNX9	186 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	ZNF355P	Q9NSJ1	428 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	COL7A1	Q02388	2944 aa		10.11	□□□□□ -0.79
PRKCSH-218	ENST00000593053	TMEM235	A6NFC5	223 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	SRRM4	A7MD48	611 aa	Known RBP	10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053		H3BMQ9	156 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	HSPB1	P04792	205 aa	Known RBP	10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	CLEC2L	P0C7M8	214 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	RRAS	P10301	218 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	DUT	P33316	252 aa	Known RBP	10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	SDC2	P34741	201 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	MXD1	Q05195	221 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	CTF1	Q16619	201 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	ZNF429	Q86V71	674 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	ANKRD13B	Q86YJ7	626 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	POC5	Q8NA72	575 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	LGALS14	Q8TCE9	139 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	DGCR14	Q96DF8	476 aa	Known RBP	10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	ADTRP	Q96IZ2	230 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	NDUFA13	Q9P0J0	144 aa		10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	RSL24D1	Q9UHA3	163 aa	Known RBP	10.1	□□□□□ -0.79
PRKCSH-218	ENST00000593053	LOC100506127	A0A0U1RQW1	187 aa		10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	LINC00473	A8K010	186 aa		10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	SCGN	O76038	276 aa		10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	GABARAP	O95166	117 aa		10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	CRYZL1	O95825	349 aa		10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	CD36	P16671	472 aa		10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	NFYA	P23511	347 aa	Predicted RBP	10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	GNG2	P59768	71 aa		10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	SPCS2	Q15005	226 aa		10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	DDB2	Q92466	427 aa		10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	DCSTAMP	Q9H295	470 aa		10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	RNF167	Q9H6Y7	350 aa		10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	RHBDL2	Q9NX52	303 aa		10.09	□□□□□ -0.79
PRKCSH-218	ENST00000593053	C13orf42	A0A1B0GVH6	325 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053	CCDC160	A6NGH7	325 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053		H3BUA1	57 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053	SSX5	O60225	188 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053	CTXN2	P0C2S0	81 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053	UBE2K	P61086	200 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053	PITPNA	Q00169	270 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053	PRSS8	Q16651	343 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053	MRGPRG-AS1	Q2M3A8	158 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053	VMA21	Q3ZAQ7	101 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053	ACSM6	Q6P461	480 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053	IDO2	Q6ZQW0	420 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053	OR2W1	Q9Y3N9	320 aa		10.08	□□□□□ -0.8
PRKCSH-218	ENST00000593053	MSGN1	A6NI15	193 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	HLA-DQB1	P01920	261 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	NHLRC4	P0CG21	123 aa	Predicted RBP	10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	APELA	P0DMC3	54 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	SPN	P16150	400 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	TMBIM6	P55061	237 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	NCS1	P62166	190 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	LSM3	P62310	102 aa	Known RBP	10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	DEFA5	Q01523	94 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	TNXA	Q16473	311 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	IDNK	Q5T6J7	187 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	CNIH2	Q6PI25	160 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	ZNF645	Q8N7E2	425 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	TEX45	Q8NA69	505 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	OR5H6	Q8NGV6	325 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	OSR1	Q8TAX0	266 aa	Predicted RBP	10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	TMEM68	Q96MH6	324 aa		10.07	□□□□□ -0.8
PRKCSH-218	ENST00000593053	PHB2	Q99623	299 aa		10.07	□□□□□ -0.8

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