RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 BORCS5Q969J3 196 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 HSD17B10Q99714 261 aaKnown RBP7.92□□□□□ -1.14
BRCA1-227ENST00000591849 SCPEP1Q9HB40 452 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 VWFP04275 2813 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 IGKV1D-13A0A0B4J2D9 117 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 ADARB2-AS1A8MUL3 147 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 G3V318 75 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 TNFSF12O43508 249 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 ACTL6BO94805 426 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 CA2P00918 260 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 PPYP01298 95 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 IGHG4P01861 327 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 RPLP1P05386 114 aaKnown RBP7.91□□□□□ -1.14
BRCA1-227ENST00000591849 IGKV1-13P0DP09 117 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 HLA-DMAP28067 261 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 DEFA6Q01524 100 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 SPCS2Q15005 226 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 PDLIM3Q53GG5 364 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-227ENST00000591849 TMEM177Q53S58 311 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 RNASE12Q5GAN4 147 aaKnown RBP7.91□□□□□ -1.14
BRCA1-227ENST00000591849 ZNF562Q6V9R5 426 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 ZNF66Q6ZN08 573 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 LCNL1Q6ZST4 164 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 TMEM17Q86X19 198 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 C1QL4Q86Z23 238 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 MFSD4AQ8N468 514 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 TCTEX1D1Q8N7M0 179 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 ZBTB34Q8NCN2 500 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 OR6F1Q8NGZ6 308 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 OSR1Q8TAX0 266 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-227ENST00000591849 GIMAP1Q8WWP7 306 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 BCL7BQ9BQE9 202 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 ZNF2Q9BSG1 426 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-227ENST00000591849 CCL28Q9NRJ3 127 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 ZNF355PQ9NSJ1 428 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 TAS2R8Q9NYW2 309 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 EXTL2Q9UBQ6 330 aa7.91□□□□□ -1.14
BRCA1-227ENST00000591849 A0A1W2PN81 502 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 LINC00473A8K010 186 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 SULT1C2O00338 296 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 CREBL2O60519 120 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-227ENST00000591849 IFNA6P05013 189 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 S100GP29377 79 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 SLC6A1P30531 599 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 RCVRNP35243 200 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 CHRNA7P36544 502 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 KIR2DS2P43631 304 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 RFX2P48378 723 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 RAB25P57735 213 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 CATR1Q13166 79 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 ACTBL2Q562R1 376 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 C8orf86Q6ZUL3 223 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 TEX45Q8NA69 505 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 POC5Q8NA72 575 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 OR4S2Q8NH73 311 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 ARPC1AQ92747 370 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 SNAPC3Q92966 411 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 C5orf30Q96GV9 206 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 PHB2Q99623 299 aa7.9□□□□□ -1.14
BRCA1-227ENST00000591849 FAM103A1Q9BTL3 118 aaKnown RBP7.9□□□□□ -1.14
BRCA1-227ENST00000591849 FOXA2Q9Y261 457 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-227ENST00000591849 MPPED1O15442 326 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 NAT1P18440 290 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 HRH1P35367 487 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 MYCNOSP40205 109 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 CDX1P47902 265 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-227ENST00000591849 UBE2KP61086 200 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 RPL30P62888 115 aaKnown RBP7.89□□□□□ -1.15
BRCA1-227ENST00000591849 DYRK1AQ13627 763 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 MSMO1Q15800 293 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 TNXAQ16473 311 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 AADACL3Q5VUY0 350 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 DHRS11Q6UWP2 260 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 C18orf65Q6ZTR6 163 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 OVCH2Q7RTZ1 564 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 CMTM1Q8IZ96 169 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 LFNGQ8NES3 379 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 GPX8Q8TED1 209 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 FCAMRQ8WWV6 532 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 DDB2Q92466 427 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 MS4A10Q96PG2 267 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 AIFM2Q9BRQ8 373 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 C6orf62Q9GZU0 229 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-227ENST00000591849 TPSG1Q9NRR2 321 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 ZNF580Q9UK33 172 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 VSIG4Q9Y279 399 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 NUBP2Q9Y5Y2 271 aa7.89□□□□□ -1.15
BRCA1-227ENST00000591849 SRRM4A7MD48 611 aaKnown RBP7.88□□□□□ -1.15
BRCA1-227ENST00000591849 G3V4G9 280 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 CCL24O00175 119 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 CTDSP2O14595 271 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 HRASP01112 189 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 IGLV2-23P01705 113 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 PSMB8P28062 276 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 RAB9AP51151 201 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 NDPQ00604 133 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 CFHR3Q02985 330 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 PJVKQ0ZLH3 352 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 AKIRIN2Q53H80 203 aa7.88□□□□□ -1.15
BRCA1-227ENST00000591849 PYHIN1Q6K0P9 492 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms