RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 ACOT12Q8WYK0 555 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 CCDC140Q96MF4 163 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 MAP6D1Q9H9H5 199 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 ZNF221Q9UK13 617 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 EXOSC1Q9Y3B2 195 aaKnown RBP9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 TCTAP57738 103 aa9.35□□□□□ -0.91
NEDD4L-227ENST00000590020 MRPL28Q13084 256 aaKnown RBP9.35□□□□□ -0.91
NEDD4L-227ENST00000590020 ZNF124Q15973 351 aa9.35□□□□□ -0.91
NEDD4L-227ENST00000590020 C10orf55Q5SWW7 151 aa9.35□□□□□ -0.91
NEDD4L-227ENST00000590020 SLC38A6Q8IZM9 456 aa9.35□□□□□ -0.91
NEDD4L-227ENST00000590020 HDHD3Q9BSH5 251 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-227ENST00000590020 POMPQ9Y244 141 aa9.35□□□□□ -0.91
NEDD4L-227ENST00000590020 IGHV3-35A0A0C4DH35 117 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 A8MWP6 167 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 ITGB1BP1O14713 200 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 CAPGP40121 348 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 SNRPGP62308 76 aaKnown RBP9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 PRSS8Q16651 343 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 FAM106AQ4KMX7 169 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 LCE2AQ5TA79 106 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 MEDAGQ5VYS4 303 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 OR10K2Q6IF99 312 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 RPL22L1Q6P5R6 122 aaKnown RBP9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 ZNF880Q6PDB4 577 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 APRG1Q8IVJ8 170 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 OR11H2Q8NH07 326 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 TRUB1Q8WWH5 349 aaKnown RBP9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 EDARADDQ8WWZ3 215 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 NEDD4LQ96PU5 975 aa9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 C11orf68Q9H3H3 251 aaKnown RBP9.34□□□□□ -0.91
NEDD4L-227ENST00000590020 TRAV25A0A0B4J276 109 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 HMX3A6NHT5 357 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 SAC3D1A6NKF1 404 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 DYNC1I1O14576 645 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 NAPSAO96009 420 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 SCTP09683 121 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 ZBTB25P24278 435 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 MED21Q13503 144 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 ZIK1Q3SY52 487 aaPredicted RBP9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 TMEM177Q53S58 311 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 TTC9CQ8N5M4 171 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 OR52I1Q8NGK6 324 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 C5orf30Q96GV9 206 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 NICN1Q9BSH3 213 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 KCNK15Q9H427 330 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 CKLFQ9UBR5 152 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 OAZ3Q9UMX2 235 aa9.33□□□□□ -0.92
NEDD4L-227ENST00000590020 IGHV4-4A0A075B6R2 117 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 TRBV5-5A0A0J9YX44 114 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 LIMS3P0CW19 117 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 LIMS4P0CW20 117 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 HTR2CP28335 458 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 GYS2P54840 703 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 HLA-DRB3P79483 266 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 MED22Q15528 200 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 FAM209BQ5JX69 171 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 OR2G6Q5TZ20 316 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 CEACAM19Q7Z692 300 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 CD300LFQ8TDQ1 290 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 PTX4Q96A99 478 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 GALNT14Q96FL9 552 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 MYCBPQ99417 103 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 SPAG8Q99932 426 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 ZNF430Q9H8G1 570 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 RDH8Q9NYR8 311 aa9.32□□□□□ -0.92
NEDD4L-227ENST00000590020 IGKV1-6A0A0C4DH72 117 aa9.31□□□□□ -0.92
NEDD4L-227ENST00000590020 SNTNA6NMZ2 147 aa9.31□□□□□ -0.92
NEDD4L-227ENST00000590020 LALBAP00709 142 aa9.31□□□□□ -0.92
NEDD4L-227ENST00000590020 CD3GP09693 182 aa9.31□□□□□ -0.92
NEDD4L-227ENST00000590020 C8orf88P0DMB2 117 aa9.31□□□□□ -0.92
NEDD4L-227ENST00000590020 VMA21Q3ZAQ7 101 aa9.31□□□□□ -0.92
NEDD4L-227ENST00000590020 OR4A47Q6IF82 309 aa9.31□□□□□ -0.92
NEDD4L-227ENST00000590020 ZFP41Q8N8Y5 198 aa9.31□□□□□ -0.92
NEDD4L-227ENST00000590020 TEX45Q8NA69 505 aa9.31□□□□□ -0.92
NEDD4L-227ENST00000590020 CSTL1Q9H114 145 aa9.31□□□□□ -0.92
NEDD4L-227ENST00000590020 OR2D2Q9H210 308 aa9.31□□□□□ -0.92
NEDD4L-227ENST00000590020 SDHAF2Q9NX18 166 aa9.31□□□□□ -0.92
NEDD4L-227ENST00000590020 MPTX1A8MV57 137 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 CRYZL1O95825 349 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 RPA2P15927 270 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 GABRB1P18505 474 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 ETV1P50549 477 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 UBE2KP61086 200 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 RPS11P62280 158 aaKnown RBP eCLIP9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 GNGT1P63211 74 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 CBX3Q13185 183 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 Q499Y3 187 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 CCDC58Q4VC31 144 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 OR4A5Q8NH83 315 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 SMIM19Q96E16 107 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 C5orf66Q9H5L9 145 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 MRPL27Q9P0M9 148 aaKnown RBP9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 AK3Q9UIJ7 227 aa9.3□□□□□ -0.92
NEDD4L-227ENST00000590020 IGLV2-18A0A075B6J9 118 aa9.29□□□□□ -0.92
NEDD4L-227ENST00000590020 MFSD2BA6NFX1 497 aa9.29□□□□□ -0.92
NEDD4L-227ENST00000590020 C11orf94C9JXX5 98 aa9.29□□□□□ -0.92
NEDD4L-227ENST00000590020 E7EUB6 86 aa9.29□□□□□ -0.92
NEDD4L-227ENST00000590020 TSPAN4O14817 238 aa9.29□□□□□ -0.92
NEDD4L-227ENST00000590020 CLEC3BP05452 202 aa9.29□□□□□ -0.92
NEDD4L-227ENST00000590020 SAA1P0DJI8 122 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms