RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 AGAP20933 346 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 COL8A2P25067 703 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 KIR2DS2P43631 304 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 BRWD1-AS2P59051 145 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 LINC00205P59089 165 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 RPL23AP62750 156 aaKnown RBP7.21□□□□□ -1.26
SMAD4-206ENST00000588860 AANATQ16613 207 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 EIF5AL1Q6IS14 154 aaKnown RBP7.21□□□□□ -1.26
SMAD4-206ENST00000588860 H2BFWTQ7Z2G1 175 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.21□□□□□ -1.26
SMAD4-206ENST00000588860 ZNF439Q8NDP4 499 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 OR10A7Q8NGE5 316 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 CD300LFQ8TDQ1 290 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 ZNF714Q96N38 554 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 RAB40CQ96S21 281 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 S1PR3Q99500 378 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 RAB1BQ9H0U4 201 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 LINC00574Q9H8X3 128 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 CBLN4Q9NTU7 201 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 MED9Q9NWA0 146 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 KAAG1Q9UBP8 84 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 RPUSD1Q9UJJ7 312 aaKnown RBP7.21□□□□□ -1.26
SMAD4-206ENST00000588860 MFSD2BA6NFX1 497 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 TOR1AO14656 332 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 RAB29O14966 203 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 SYNGR2O43760 224 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 MED6O75586 246 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 CST7O76096 145 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 TMEM50AO95807 157 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 IGHV2-70P01814 119 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 P0C879 139 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 PAX9P55771 341 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 MRPS11P82912 194 aaKnown RBP7.2□□□□□ -1.26
SMAD4-206ENST00000588860 TMEM267Q0VDI3 215 aaPredicted RBP7.2□□□□□ -1.26
SMAD4-206ENST00000588860 CLINT1Q14677 625 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 MIDNQ504T8 468 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 AVPI1Q5T686 147 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 TMEM200BQ69YZ2 307 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 C11orf71Q6IPW1 123 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 STX12Q86Y82 276 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 TMEM252Q8N6L7 170 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 LRRC20Q8TCA0 184 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 R3HDM4Q96D70 268 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 SPOCK3Q9BQ16 436 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 REG4Q9BYZ8 158 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 ARV1Q9H2C2 271 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 RBKSQ9H477 322 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 COA4Q9NYJ1 87 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 PSENENQ9NZ42 101 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 GAB2Q9UQC2 676 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 LAMP3Q9UQV4 416 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 PRELID3BQ9Y3B1 194 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 SESN1Q9Y6P5 492 aa7.2□□□□□ -1.26
SMAD4-206ENST00000588860 ZNF705EA8MWA4 302 aaPredicted RBP7.19□□□□□ -1.26
SMAD4-206ENST00000588860 FAM90A26D6RGX4 464 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 H3BP45 60 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 C19orf84I3L1E1 186 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 I3L521 148 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 FGF16O43320 207 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 PROP1O75360 226 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 FBXO24O75426 580 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 HPRT1P00492 218 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 SOD3P08294 240 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 THBS3P49746 956 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 DYNLT3P51808 116 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 ERVFRD-1P60508 538 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 ERVK-16P61578 105 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 BAXQ07812 192 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 TOR2AQ5JU69 321 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 HEPN1Q6WQI6 88 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 C1orf229Q6ZS94 237 aaPredicted RBP7.19□□□□□ -1.26
SMAD4-206ENST00000588860 SLC25A48Q6ZT89 311 aaKnown RBP7.19□□□□□ -1.26
SMAD4-206ENST00000588860 ODF3L1Q8IXM7 274 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 ZNF295-AS1Q8N0V1 137 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 UBAC2Q8NBM4 344 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 OR1S2Q8NGQ3 325 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 OR4S2Q8NH73 311 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 RNF141Q8WVD5 230 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 NEU4Q8WWR8 484 aaPredicted RBP7.19□□□□□ -1.26
SMAD4-206ENST00000588860 RAB39BQ96DA2 213 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 ADTRPQ96IZ2 230 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 SMIM8Q96KF7 97 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 GINS3Q9BRX5 216 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 UBTD1Q9HAC8 227 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 BARX1Q9HBU1 254 aaPredicted RBP7.19□□□□□ -1.26
SMAD4-206ENST00000588860 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.19□□□□□ -1.26
SMAD4-206ENST00000588860 ZNRD1Q9P1U0 126 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 OTOGQ6ZRI0 2925 aa7.19□□□□□ -1.26
SMAD4-206ENST00000588860 NAV3Q8IVL0 2385 aa7.18□□□□□ -1.26
SMAD4-206ENST00000588860 TRBV23-1A0A0A0MS06 115 aa7.18□□□□□ -1.26
SMAD4-206ENST00000588860 MARCH11A6NNE9 402 aa7.18□□□□□ -1.26
SMAD4-206ENST00000588860 RBFOX2O43251 390 aaKnown RBP eCLIP7.18□□□□□ -1.26
SMAD4-206ENST00000588860 TXNL1O43396 289 aa7.18□□□□□ -1.26
SMAD4-206ENST00000588860 RBMXL2O75526 392 aaKnown RBP7.18□□□□□ -1.26
SMAD4-206ENST00000588860 LY6HO94772 140 aa7.18□□□□□ -1.26
SMAD4-206ENST00000588860 SULT1A1P50225 295 aa7.18□□□□□ -1.26
SMAD4-206ENST00000588860 DLX6P56179 175 aa7.18□□□□□ -1.26
SMAD4-206ENST00000588860 OR2B8PP59922 312 aa7.18□□□□□ -1.26
SMAD4-206ENST00000588860 UBE2KP61086 200 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms