RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 A0A1B0GU03 582 aa21.11■□□□□ 0.97
SCAMP4-210ENST00000588555 HMSDA8MTL9 139 aa21.11■□□□□ 0.97
SCAMP4-210ENST00000588555 PITX3O75364 302 aa21.11■□□□□ 0.97
SCAMP4-210ENST00000588555 MBPP02686 304 aaPredicted RBP21.11■□□□□ 0.97
SCAMP4-210ENST00000588555 OR5AN1Q8NGI8 311 aa21.11■□□□□ 0.97
SCAMP4-210ENST00000588555 INSIG2Q9Y5U4 225 aa21.11■□□□□ 0.97
SCAMP4-210ENST00000588555 PDZD2O15018 2839 aa21.11■□□□□ 0.97
SCAMP4-210ENST00000588555 HECTD1Q9ULT8 2610 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 LY6LH3BQJ8 138 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 HOXB4P17483 251 aaPredicted RBP21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 LDLRAD2Q5SZI1 272 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 TGIF2LXQ8IUE1 241 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 RNASE11Q8TAA1 199 aaKnown RBP21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 TBX15Q96SF7 602 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 MBD2Q9UBB5 411 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 BOLA1Q9Y3E2 137 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 AMMECR1Q9Y4X0 333 aaPredicted RBP21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 MARCH11A6NNE9 402 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 RNASEK-C17orf49H0YIS7 233 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 H0YJW9 148 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 ATG12O94817 140 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 TOX4O94842 621 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 LYL1P12980 280 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 EPHA1P21709 976 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 THOC7Q6I9Y2 204 aaKnown RBP21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 TMEM65Q6PI78 240 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 R3HDM4Q96D70 268 aa21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 RBMXL1Q96E39 390 aaKnown RBP21.1■□□□□ 0.97
SCAMP4-210ENST00000588555 CRYZL1O95825 349 aa21.09■□□□□ 0.97
SCAMP4-210ENST00000588555 LGALSLQ3ZCW2 172 aaPredicted RBP21.09■□□□□ 0.97
SCAMP4-210ENST00000588555 PRSS54Q6PEW0 395 aa21.09■□□□□ 0.97
SCAMP4-210ENST00000588555 THAP6Q8TBB0 222 aa21.09■□□□□ 0.97
SCAMP4-210ENST00000588555 C1orf159Q96HA4 380 aa21.09■□□□□ 0.97
SCAMP4-210ENST00000588555 PCGF1Q9BSM1 259 aa21.09■□□□□ 0.97
SCAMP4-210ENST00000588555 PLSCR3Q9NRY6 295 aa21.09■□□□□ 0.97
SCAMP4-210ENST00000588555 SLC35D1Q9NTN3 355 aa21.09■□□□□ 0.97
SCAMP4-210ENST00000588555 OR5AC2Q9NZP5 309 aa21.09■□□□□ 0.97
SCAMP4-210ENST00000588555 CACNG5Q9UF02 275 aa21.09■□□□□ 0.97
SCAMP4-210ENST00000588555 SVEP1Q4LDE5 3571 aa21.09■□□□□ 0.97
SCAMP4-210ENST00000588555 IGKV1-16P04430 117 aa21.08■□□□□ 0.97
SCAMP4-210ENST00000588555 ARG1P05089 322 aa21.08■□□□□ 0.97
SCAMP4-210ENST00000588555 S100A10P60903 97 aa21.08■□□□□ 0.97
SCAMP4-210ENST00000588555 PAX8Q06710 450 aa21.08■□□□□ 0.97
SCAMP4-210ENST00000588555 SMCO1Q147U7 214 aa21.08■□□□□ 0.97
SCAMP4-210ENST00000588555 Q5PR19 223 aa21.08■□□□□ 0.97
SCAMP4-210ENST00000588555 KRTAP1-3Q8IUG1 177 aa21.08■□□□□ 0.97
SCAMP4-210ENST00000588555 ARPC5O15511 151 aa21.08■□□□□ 0.96
SCAMP4-210ENST00000588555 SCGB1D2O95969 90 aa21.08■□□□□ 0.96
SCAMP4-210ENST00000588555 TAGLNQ01995 201 aaKnown RBP21.08■□□□□ 0.96
SCAMP4-210ENST00000588555 RTL8BQ17RB0 113 aa21.08■□□□□ 0.96
SCAMP4-210ENST00000588555 DHRS7BQ6IAN0 325 aaPredicted RBP21.08■□□□□ 0.96
SCAMP4-210ENST00000588555 COA4Q9NYJ1 87 aa21.08■□□□□ 0.96
SCAMP4-210ENST00000588555 HSPB11Q9Y547 144 aa21.08■□□□□ 0.96
SCAMP4-210ENST00000588555 K7EPK0 472 aa21.07■□□□□ 0.96
SCAMP4-210ENST00000588555 PET100P0DJ07 73 aa21.07■□□□□ 0.96
SCAMP4-210ENST00000588555 CXCL2P19875 107 aa21.07■□□□□ 0.96
SCAMP4-210ENST00000588555 MIDNQ504T8 468 aa21.07■□□□□ 0.96
SCAMP4-210ENST00000588555 CXorf66Q5JRM2 361 aaPredicted RBP21.07■□□□□ 0.96
SCAMP4-210ENST00000588555 ZNF546Q86UE3 836 aa21.07■□□□□ 0.96
SCAMP4-210ENST00000588555 FAM71E2Q8N5Q1 922 aa21.07■□□□□ 0.96
SCAMP4-210ENST00000588555 OR1S1Q8NH92 325 aa21.07■□□□□ 0.96
SCAMP4-210ENST00000588555 TNFSF18Q9UNG2 199 aa21.07■□□□□ 0.96
SCAMP4-210ENST00000588555 DEDDO75618 318 aa21.06■□□□□ 0.96
SCAMP4-210ENST00000588555 APOA2P02652 100 aa21.06■□□□□ 0.96
SCAMP4-210ENST00000588555 NQO2P16083 231 aa21.06■□□□□ 0.96
SCAMP4-210ENST00000588555 NKX2-1P43699 371 aaPredicted RBP21.06■□□□□ 0.96
SCAMP4-210ENST00000588555 ID3Q02535 119 aa21.06■□□□□ 0.96
SCAMP4-210ENST00000588555 FOXRED2Q8IWF2 684 aa21.06■□□□□ 0.96
SCAMP4-210ENST00000588555 LSM5Q9Y4Y9 91 aaKnown RBP21.06■□□□□ 0.96
SCAMP4-210ENST00000588555 POMT1Q9Y6A1 747 aa21.06■□□□□ 0.96
SCAMP4-210ENST00000588555 ST8SIA3O43173 380 aa21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 MSMBP08118 114 aa21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 RRASP10301 218 aa21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 HTR1DP28221 377 aa21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 PRSS57Q6UWY2 283 aa21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 PDZD9Q8IXQ8 264 aa21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 RCL1Q9Y2P8 373 aaKnown RBP21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 TXNL1O43396 289 aa21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 GAPDHP04406 335 aaKnown RBP21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 LOXL1Q08397 574 aaPredicted RBP21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 POU2AF1Q16633 256 aa21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 H2BFWTQ7Z2G1 175 aa21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 VKORC1L1Q8N0U8 176 aa21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 ZFP57Q9NU63 452 aa21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 DPM3Q9P2X0 92 aa21.05■□□□□ 0.96
SCAMP4-210ENST00000588555 IGHV1-3A0A0C4DH29 117 aa21.04■□□□□ 0.96
SCAMP4-210ENST00000588555 B4DSR2 109 aa21.04■□□□□ 0.96
SCAMP4-210ENST00000588555 TPTE2P1Q5T6R2 138 aa21.04■□□□□ 0.96
SCAMP4-210ENST00000588555 LHFPL4Q7Z7J7 247 aa21.04■□□□□ 0.96
SCAMP4-210ENST00000588555 PDPNQ86YL7 162 aa21.04■□□□□ 0.96
SCAMP4-210ENST00000588555 RPEQ96AT9 228 aa21.04■□□□□ 0.96
SCAMP4-210ENST00000588555 RNF222A6NCQ9 220 aa21.03■□□□□ 0.96
SCAMP4-210ENST00000588555 LEUTXA8MZ59 168 aa21.03■□□□□ 0.96
SCAMP4-210ENST00000588555 UBE2E1P51965 193 aa21.03■□□□□ 0.96
SCAMP4-210ENST00000588555 TMEM177Q53S58 311 aa21.03■□□□□ 0.96
SCAMP4-210ENST00000588555 SSX9Q7RTT3 188 aa21.03■□□□□ 0.96
SCAMP4-210ENST00000588555 DMBX1Q8NFW5 382 aa21.03■□□□□ 0.96
SCAMP4-210ENST00000588555 DCUN1D4Q92564 292 aa21.03■□□□□ 0.96
SCAMP4-210ENST00000588555 RHOVQ96L33 236 aa21.03■□□□□ 0.96
SCAMP4-210ENST00000588555 C11orf1Q9H5F2 150 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms