RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 NKAIN3Q8N8D7 197 aa6.56□□□□□ -1.36
NUP85-223ENST00000583877 APH1BQ8WW43 257 aa6.56□□□□□ -1.36
NUP85-223ENST00000583877 PTX4Q96A99 478 aa6.56□□□□□ -1.36
NUP85-223ENST00000583877 PGLYRP3Q96LB9 341 aa6.56□□□□□ -1.36
NUP85-223ENST00000583877 TSC22D3Q99576 134 aa6.56□□□□□ -1.36
NUP85-223ENST00000583877 SLC29A1Q99808 456 aa6.56□□□□□ -1.36
NUP85-223ENST00000583877 ZC4H2Q9NQZ6 224 aa6.56□□□□□ -1.36
NUP85-223ENST00000583877 TECRQ9NZ01 308 aaKnown RBP6.56□□□□□ -1.36
NUP85-223ENST00000583877 TRBV6-6A0A0A6YYG2 114 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 LOC100130705A0A1B0GUX0 176 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 IRGMA1A4Y4 181 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 FAM223BA6NKX1 122 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 RBMXL2O75526 392 aaKnown RBP6.55□□□□□ -1.36
NUP85-223ENST00000583877 CRYGBP07316 175 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 UBBP0CG47 229 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 KIR2DS2P43631 304 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 LINC00205P59089 165 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 RPS27AP62979 156 aaKnown RBP6.55□□□□□ -1.36
NUP85-223ENST00000583877 CBX3Q13185 183 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 RCN1Q15293 331 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 SMN1Q16637 294 aaKnown RBP6.55□□□□□ -1.36
NUP85-223ENST00000583877 CEMP1Q6PRD7 247 aaPredicted RBP6.55□□□□□ -1.36
NUP85-223ENST00000583877 FAM223AQ8IWN6 122 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 RPP25LQ8N5L8 163 aaKnown RBP6.55□□□□□ -1.36
NUP85-223ENST00000583877 ADAD2Q8NCV1 583 aaKnown RBP6.55□□□□□ -1.36
NUP85-223ENST00000583877 DERL3Q96Q80 235 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 RIMS4Q9H426 269 aaPredicted RBP6.55□□□□□ -1.36
NUP85-223ENST00000583877 VCX3AQ9NNX9 186 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 SLC35D1Q9NTN3 355 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 OR1A1Q9P1Q5 309 aa6.55□□□□□ -1.36
NUP85-223ENST00000583877 EXOSC1Q9Y3B2 195 aaKnown RBP6.55□□□□□ -1.36
NUP85-223ENST00000583877 DNAH17Q9UFH2 4485 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 FAT2Q9NYQ8 4349 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 C2orf70A6NJV1 201 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 M0R1X1 148 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 WBP4O75554 376 aaKnown RBP6.54□□□□□ -1.36
NUP85-223ENST00000583877 TUSC2O75896 110 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 NDUFB8O95169 186 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 OR9G9P0C7N8 305 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 FOLR2P14207 255 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 HTR2CP28335 458 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 HLA-DRB3P79483 266 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 RHOGP84095 191 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 ATP5G2Q06055 141 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 TNFRSF9Q07011 255 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 EXOSC2Q13868 293 aaKnown RBP6.54□□□□□ -1.36
NUP85-223ENST00000583877 FAM209BQ5JX69 171 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 OR10K2Q6IF99 312 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 SLC16A13Q7RTY0 426 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 WFDC3Q8IUB2 231 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.54□□□□□ -1.36
NUP85-223ENST00000583877 ZNF485Q8NCK3 441 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 ZNF555Q8NEP9 628 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 THRSPQ92748 146 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 C9orf16Q9BUW7 83 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 GGTLC1Q9BX51 225 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 TM2D1Q9BX74 207 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 TMEM59Q9BXS4 323 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 AKIP1Q9NQ31 210 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 PLEKHJ1Q9NW61 149 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 CLEC2DQ9UHP7 191 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 ZNF230Q9UIE0 474 aaPredicted RBP6.54□□□□□ -1.36
NUP85-223ENST00000583877 MGAT4AQ9UM21 535 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 DIMT1Q9UNQ2 313 aaKnown RBP6.54□□□□□ -1.36
NUP85-223ENST00000583877 KLK5Q9Y337 293 aaPredicted RBP6.54□□□□□ -1.36
NUP85-223ENST00000583877 SELENOKQ9Y6D0 94 aa6.54□□□□□ -1.36
NUP85-223ENST00000583877 DNAH2Q9P225 4427 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 LOC102724200A0A096LPH7 203 aaPredicted RBP6.53□□□□□ -1.36
NUP85-223ENST00000583877 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.53□□□□□ -1.36
NUP85-223ENST00000583877 TRBV9A0A0B4J1U6 114 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 A0A0J9YWU9 116 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 DPPA5A6NC42 116 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 MSGN1A6NI15 193 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 LGALS9O00182 355 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 MAPK3P27361 379 aaPredicted RBP6.53□□□□□ -1.36
NUP85-223ENST00000583877 HSPA13P48723 471 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 ZNF45Q02386 682 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 TNXAQ16473 311 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 MRGPRG-AS1Q2M3A8 158 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 GLT8D1Q68CQ7 371 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 KCNG3Q8TAE7 436 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 TMEM80Q96HE8 168 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 HARBI1Q96MB7 349 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 NICN1Q9BSH3 213 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 Q9H521 79 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 TP53TG1Q9Y2A0 90 aa6.53□□□□□ -1.36
NUP85-223ENST00000583877 SMIM31A0A1B0GVY4 71 aa6.52□□□□□ -1.37
NUP85-223ENST00000583877 SRRM4A7MD48 611 aaKnown RBP6.52□□□□□ -1.37
NUP85-223ENST00000583877 NOTOA8MTQ0 251 aa6.52□□□□□ -1.37
NUP85-223ENST00000583877 CASQ2O14958 399 aaPredicted RBP6.52□□□□□ -1.37
NUP85-223ENST00000583877 PRH1P02810 166 aa6.52□□□□□ -1.37
NUP85-223ENST00000583877 CD1AP06126 327 aa6.52□□□□□ -1.37
NUP85-223ENST00000583877 SCTP09683 121 aa6.52□□□□□ -1.37
NUP85-223ENST00000583877 CELP19835 753 aa6.52□□□□□ -1.37
NUP85-223ENST00000583877 EDN2P20800 178 aa6.52□□□□□ -1.37
NUP85-223ENST00000583877 CBLN1P23435 193 aa6.52□□□□□ -1.37
NUP85-223ENST00000583877 BMI1P35226 326 aa6.52□□□□□ -1.37
NUP85-223ENST00000583877 TAS2R43P59537 309 aa6.52□□□□□ -1.37
NUP85-223ENST00000583877 EWSR1Q01844 656 aaKnown RBP eCLIP6.52□□□□□ -1.37
NUP85-223ENST00000583877 UNC119Q13432 240 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms