RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 RASL11BQ9BPW5 248 aa17.11■□□□□ 0.33
TSEN54-208ENST00000583173 RSRP1Q9BUV0 290 aa17.11■□□□□ 0.33
TSEN54-208ENST00000583173 PGLYRP1O75594 196 aaPredicted RBP17.1■□□□□ 0.33
TSEN54-208ENST00000583173 RPS16P62249 146 aaKnown RBP17.1■□□□□ 0.33
TSEN54-208ENST00000583173 SRSF4Q08170 494 aaKnown RBP17.1■□□□□ 0.33
TSEN54-208ENST00000583173 SPANXN2Q5MJ10 180 aa17.1■□□□□ 0.33
TSEN54-208ENST00000583173 LINC00299Q6ZSB3 139 aa17.1■□□□□ 0.33
TSEN54-208ENST00000583173 TMEM17Q86X19 198 aa17.1■□□□□ 0.33
TSEN54-208ENST00000583173 Q8N402 240 aa17.1■□□□□ 0.33
TSEN54-208ENST00000583173 C3orf56Q8N813 242 aa17.1■□□□□ 0.33
TSEN54-208ENST00000583173 MRGPRFQ96AM1 343 aa17.1■□□□□ 0.33
TSEN54-208ENST00000583173 CITED1Q99966 193 aa17.1■□□□□ 0.33
TSEN54-208ENST00000583173 FCN1O00602 326 aa17.09■□□□□ 0.33
TSEN54-208ENST00000583173 TNFSF12O43508 249 aa17.09■□□□□ 0.33
TSEN54-208ENST00000583173 HLA-DRB1P01911 266 aa17.09■□□□□ 0.33
TSEN54-208ENST00000583173 IFNA6P05013 189 aa17.09■□□□□ 0.33
TSEN54-208ENST00000583173 VDAC2P45880 294 aaPredicted RBP17.09■□□□□ 0.33
TSEN54-208ENST00000583173 KLF9Q13886 244 aaPredicted RBP17.09■□□□□ 0.33
TSEN54-208ENST00000583173 RTL8BQ17RB0 113 aa17.09■□□□□ 0.33
TSEN54-208ENST00000583173 MRGPRG-AS1Q2M3A8 158 aa17.09■□□□□ 0.33
TSEN54-208ENST00000583173 LIN54Q6MZP7 749 aa17.09■□□□□ 0.33
TSEN54-208ENST00000583173 OR4C16Q8NGL9 310 aa17.09■□□□□ 0.33
TSEN54-208ENST00000583173 TERB2Q8NHR7 220 aa17.09■□□□□ 0.33
TSEN54-208ENST00000583173 TSNAXQ99598 290 aaKnown RBP17.09■□□□□ 0.33
TSEN54-208ENST00000583173 HSPB9Q9BQS6 159 aa17.09■□□□□ 0.33
TSEN54-208ENST00000583173 FBXL15Q9H469 300 aa17.09■□□□□ 0.33
TSEN54-208ENST00000583173 HAX1O00165 279 aa17.08■□□□□ 0.32
TSEN54-208ENST00000583173 FCGR3BO75015 233 aa17.08■□□□□ 0.32
TSEN54-208ENST00000583173 SPDEFO95238 335 aa17.08■□□□□ 0.32
TSEN54-208ENST00000583173 AKAIN1P0CW23 69 aa17.08■□□□□ 0.32
TSEN54-208ENST00000583173 MEF2DQ14814 521 aa17.08■□□□□ 0.32
TSEN54-208ENST00000583173 C9orf152Q5JTZ5 239 aa17.08■□□□□ 0.32
TSEN54-208ENST00000583173 LPCAT3Q6P1A2 487 aa17.08■□□□□ 0.32
TSEN54-208ENST00000583173 KCTD9Q7L273 389 aa17.08■□□□□ 0.32
TSEN54-208ENST00000583173 GDPD1Q8N9F7 314 aa17.08■□□□□ 0.32
TSEN54-208ENST00000583173 BORCS5Q969J3 196 aa17.08■□□□□ 0.32
TSEN54-208ENST00000583173 PRELID3BQ9Y3B1 194 aa17.08■□□□□ 0.32
TSEN54-208ENST00000583173 IGHV7-81A0A0B4J1V7 117 aa17.07■□□□□ 0.32
TSEN54-208ENST00000583173 GPR31O00270 319 aa17.07■□□□□ 0.32
TSEN54-208ENST00000583173 PEX14O75381 377 aa17.07■□□□□ 0.32
TSEN54-208ENST00000583173 CRYZL1O95825 349 aa17.07■□□□□ 0.32
TSEN54-208ENST00000583173 FAAP20Q6NZ36 180 aa17.07■□□□□ 0.32
TSEN54-208ENST00000583173 KLHDC1Q8N7A1 406 aa17.07■□□□□ 0.32
TSEN54-208ENST00000583173 OSR1Q8TAX0 266 aaPredicted RBP17.07■□□□□ 0.32
TSEN54-208ENST00000583173 TCTEX1D2Q8WW35 142 aa17.07■□□□□ 0.32
TSEN54-208ENST00000583173 RBFOX2O43251 390 aaKnown RBP eCLIP17.06■□□□□ 0.32
TSEN54-208ENST00000583173 VSIG10L2P0DP72 767 aa17.06■□□□□ 0.32
TSEN54-208ENST00000583173 ZNF45Q02386 682 aa17.06■□□□□ 0.32
TSEN54-208ENST00000583173 BAK1Q16611 211 aa17.06■□□□□ 0.32
TSEN54-208ENST00000583173 SHISA2Q6UWI4 295 aa17.06■□□□□ 0.32
TSEN54-208ENST00000583173 SLC35E3Q7Z769 313 aa17.06■□□□□ 0.32
TSEN54-208ENST00000583173 SLC38A6Q8IZM9 456 aa17.06■□□□□ 0.32
TSEN54-208ENST00000583173 SLC2A8Q9NY64 477 aa17.06■□□□□ 0.32
TSEN54-208ENST00000583173 KIAA1456Q9P272 454 aa17.06■□□□□ 0.32
TSEN54-208ENST00000583173 SHOXO15266 292 aa17.05■□□□□ 0.32
TSEN54-208ENST00000583173 IGF1P05019 195 aa17.05■□□□□ 0.32
TSEN54-208ENST00000583173 EGR2P11161 476 aaPredicted RBP17.05■□□□□ 0.32
TSEN54-208ENST00000583173 KIR2DS2P43631 304 aa17.05■□□□□ 0.32
TSEN54-208ENST00000583173 TEX45Q8NA69 505 aa17.05■□□□□ 0.32
TSEN54-208ENST00000583173 OR13C8Q8NGS7 320 aa17.05■□□□□ 0.32
TSEN54-208ENST00000583173 HARBI1Q96MB7 349 aa17.05■□□□□ 0.32
TSEN54-208ENST00000583173 NOL4LQ96MY1 436 aaPredicted RBP17.05■□□□□ 0.32
TSEN54-208ENST00000583173 HRASLSQ9HDD0 168 aa17.05■□□□□ 0.32
TSEN54-208ENST00000583173 AKIP1Q9NQ31 210 aa17.05■□□□□ 0.32
TSEN54-208ENST00000583173 METTL1Q9UBP6 276 aaKnown RBP17.05■□□□□ 0.32
TSEN54-208ENST00000583173 ZNF580Q9UK33 172 aa17.05■□□□□ 0.32
TSEN54-208ENST00000583173 PLXNB1O43157 2135 aa17.05■□□□□ 0.32
TSEN54-208ENST00000583173 TRRAPQ9Y4A5 3859 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 DISC1C4P0D8 188 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 SLC25A17O43808 307 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 RAMP3O60896 148 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 UBE2KP61086 200 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 RND3P61587 244 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 SSBP2P81877 361 aaPredicted RBP17.04■□□□□ 0.32
TSEN54-208ENST00000583173 CBX3Q13185 183 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 ZNF585BQ52M93 769 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 OR2B11Q5JQS5 317 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 CMTM1Q8IZ96 169 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 OR4S2Q8NH73 311 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 OR51J1Q9H342 316 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 TPSG1Q9NRR2 321 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 PTTG2Q9NZH5 202 aa17.04■□□□□ 0.32
TSEN54-208ENST00000583173 KCNAB3O43448 404 aa17.03■□□□□ 0.32
TSEN54-208ENST00000583173 IL6RP08887 468 aaPredicted RBP17.03■□□□□ 0.32
TSEN54-208ENST00000583173 CX3CL1P78423 397 aa17.03■□□□□ 0.32
TSEN54-208ENST00000583173 PHLDA2Q53GA4 152 aa17.03■□□□□ 0.32
TSEN54-208ENST00000583173 TCTEX1D4Q5JR98 221 aa17.03■□□□□ 0.32
TSEN54-208ENST00000583173 C10orf99Q6UWK7 81 aa17.03■□□□□ 0.32
TSEN54-208ENST00000583173 ZNF562Q6V9R5 426 aa17.03■□□□□ 0.32
TSEN54-208ENST00000583173 PPP1R27Q86WC6 154 aa17.03■□□□□ 0.32
TSEN54-208ENST00000583173 SPAG16Q8N0X2 631 aa17.03■□□□□ 0.32
TSEN54-208ENST00000583173 STPG2Q8N412 459 aa17.03■□□□□ 0.32
TSEN54-208ENST00000583173 OR51S1Q8NGJ8 323 aa17.03■□□□□ 0.32
TSEN54-208ENST00000583173 DEDD2Q8WXF8 326 aa17.03■□□□□ 0.32
TSEN54-208ENST00000583173 ZNF486Q96H40 463 aaPredicted RBP17.03■□□□□ 0.32
TSEN54-208ENST00000583173 LINC00527Q9UJ94 153 aa17.03■□□□□ 0.32
TSEN54-208ENST00000583173 AP4M1O00189 453 aa17.02■□□□□ 0.32
TSEN54-208ENST00000583173 F2RP25116 425 aa17.02■□□□□ 0.32
TSEN54-208ENST00000583173 CRIP2P52943 208 aaPredicted RBP17.02■□□□□ 0.32
TSEN54-208ENST00000583173 NDPQ00604 133 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 243 ms