RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 TAS2R19P59542 299 aa12.94□□□□□ -0.34
RNF43-206ENST00000582293 HERV-K104P61576 105 aa12.94□□□□□ -0.34
RNF43-206ENST00000582293 SSBP2P81877 361 aaPredicted RBP12.94□□□□□ -0.34
RNF43-206ENST00000582293 NDPQ00604 133 aa12.94□□□□□ -0.34
RNF43-206ENST00000582293 TAGLNQ01995 201 aaKnown RBP12.94□□□□□ -0.34
RNF43-206ENST00000582293 RNASE10Q5GAN6 216 aaKnown RBP12.94□□□□□ -0.34
RNF43-206ENST00000582293 OR2B11Q5JQS5 317 aa12.94□□□□□ -0.34
RNF43-206ENST00000582293 FAAP20Q6NZ36 180 aa12.94□□□□□ -0.34
RNF43-206ENST00000582293 STEAP1BQ6NZ63 245 aa12.94□□□□□ -0.34
RNF43-206ENST00000582293 ZBTB34Q8NCN2 500 aa12.94□□□□□ -0.34
RNF43-206ENST00000582293 TRIM63Q969Q1 353 aa12.94□□□□□ -0.34
RNF43-206ENST00000582293 HSD17B10Q99714 261 aaKnown RBP12.94□□□□□ -0.34
RNF43-206ENST00000582293 ANKRD20A5PA0PJZ0 165 aa12.93□□□□□ -0.34
RNF43-206ENST00000582293 FCGR3BO75015 233 aa12.93□□□□□ -0.34
RNF43-206ENST00000582293 CRYZL1O95825 349 aa12.93□□□□□ -0.34
RNF43-206ENST00000582293 HLA-DRB1P01911 266 aa12.93□□□□□ -0.34
RNF43-206ENST00000582293 TBPP20226 339 aa12.93□□□□□ -0.34
RNF43-206ENST00000582293 TSPAN5P62079 268 aa12.93□□□□□ -0.34
RNF43-206ENST00000582293 RPS16P62249 146 aaKnown RBP12.93□□□□□ -0.34
RNF43-206ENST00000582293 ARSJQ5FYB0 599 aaPredicted RBP12.93□□□□□ -0.34
RNF43-206ENST00000582293 TCTEX1D4Q5JR98 221 aa12.93□□□□□ -0.34
RNF43-206ENST00000582293 ZNF66Q6ZN08 573 aa12.93□□□□□ -0.34
RNF43-206ENST00000582293 SLC35E3Q7Z769 313 aa12.93□□□□□ -0.34
RNF43-206ENST00000582293 FBXO7Q9Y3I1 522 aa12.93□□□□□ -0.34
RNF43-206ENST00000582293 SLC25A17O43808 307 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 RAMP3O60896 148 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 SPDEFO95238 335 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 RAB3DO95716 219 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 CSF1P09603 554 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 RRASP10301 218 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 CD28P10747 220 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 UCP3P55916 312 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 RTL8BQ17RB0 113 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 CNPY1Q3B7I2 92 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 LIN54Q6MZP7 749 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 ARRDC1Q8N5I2 433 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 C11orf44Q8N8P7 122 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 OR4C16Q8NGL9 310 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 TCTEX1D2Q8WW35 142 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 HARBI1Q96MB7 349 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 TSNAXQ99598 290 aaKnown RBP12.92□□□□□ -0.34
RNF43-206ENST00000582293 SDHCQ99643 169 aaPredicted RBP12.92□□□□□ -0.34
RNF43-206ENST00000582293 THAP7Q9BT49 309 aaPredicted RBP12.92□□□□□ -0.34
RNF43-206ENST00000582293 RSRP1Q9BUV0 290 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 SRRQ9GZT4 340 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 KIAA1456Q9P272 454 aa12.92□□□□□ -0.34
RNF43-206ENST00000582293 METTL1Q9UBP6 276 aaKnown RBP12.92□□□□□ -0.34
RNF43-206ENST00000582293 PGLYRP1O75594 196 aaPredicted RBP12.91□□□□□ -0.34
RNF43-206ENST00000582293 IGF1P05019 195 aa12.91□□□□□ -0.34
RNF43-206ENST00000582293 EGR2P11161 476 aaPredicted RBP12.91□□□□□ -0.34
RNF43-206ENST00000582293 PTBP1P26599 531 aaKnown RBP eCLIP12.91□□□□□ -0.34
RNF43-206ENST00000582293 LGALS7P47929 136 aa12.91□□□□□ -0.34
RNF43-206ENST00000582293 CFHR3Q02985 330 aa12.91□□□□□ -0.34
RNF43-206ENST00000582293 PJVKQ0ZLH3 352 aa12.91□□□□□ -0.34
RNF43-206ENST00000582293 PYDC2Q56P42 97 aa12.91□□□□□ -0.34
RNF43-206ENST00000582293 STPG2Q8N412 459 aa12.91□□□□□ -0.34
RNF43-206ENST00000582293 ADARB2-AS1A8MUL3 147 aa12.9□□□□□ -0.34
RNF43-206ENST00000582293 GPR31O00270 319 aa12.9□□□□□ -0.34
RNF43-206ENST00000582293 SHOXO15266 292 aa12.9□□□□□ -0.34
RNF43-206ENST00000582293 ATP6V0E1O15342 81 aa12.9□□□□□ -0.34
RNF43-206ENST00000582293 CX3CL1P78423 397 aa12.9□□□□□ -0.34
RNF43-206ENST00000582293 KLF9Q13886 244 aaPredicted RBP12.9□□□□□ -0.34
RNF43-206ENST00000582293 ZNF329Q86UD4 541 aa12.9□□□□□ -0.34
RNF43-206ENST00000582293 Q8N402 240 aa12.9□□□□□ -0.34
RNF43-206ENST00000582293 OR5AU1Q8NGC0 362 aa12.9□□□□□ -0.34
RNF43-206ENST00000582293 OR51H1Q8NH63 302 aa12.9□□□□□ -0.34
RNF43-206ENST00000582293 OSR1Q8TAX0 266 aaPredicted RBP12.9□□□□□ -0.34
RNF43-206ENST00000582293 CLCC1Q96S66 551 aa12.9□□□□□ -0.34
RNF43-206ENST00000582293 OR51J1Q9H342 316 aa12.9□□□□□ -0.34
RNF43-206ENST00000582293 PRELID3BQ9Y3B1 194 aa12.9□□□□□ -0.34
RNF43-206ENST00000582293 AP4M1O00189 453 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 ARPC1BO15143 372 aaKnown RBP12.89□□□□□ -0.35
RNF43-206ENST00000582293 KCNAB3O43448 404 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 CA2P00918 260 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 RLN1P04808 185 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 IFNA6P05013 189 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 AKAIN1P0CW23 69 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 UBE2KP61086 200 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 PHLDA2Q53GA4 152 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 C19orf54Q5BKX5 351 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 IDO2Q6ZQW0 420 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 CENPVQ7Z7K6 275 aaPredicted RBP12.89□□□□□ -0.35
RNF43-206ENST00000582293 VKORC1L1Q8N0U8 176 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 SPAG16Q8N0X2 631 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 OR13C8Q8NGS7 320 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 OR4S2Q8NH73 311 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 TERB2Q8NHR7 220 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 CHPT1Q8WUD6 406 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 ZNF580Q9UK33 172 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 TRRAPQ9Y4A5 3859 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 PLXNB1O43157 2135 aa12.89□□□□□ -0.35
RNF43-206ENST00000582293 PSMB11A5LHX3 300 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 G3V318 75 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 RBFOX2O43251 390 aaKnown RBP eCLIP12.88□□□□□ -0.35
RNF43-206ENST00000582293 FBXO24O75426 580 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 SAA1P0DJI8 122 aaPredicted RBP12.88□□□□□ -0.35
RNF43-206ENST00000582293 PI3P19957 117 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 CRIP2P52943 208 aaPredicted RBP12.88□□□□□ -0.35
RNF43-206ENST00000582293 PPP5CP53041 499 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 CD83Q01151 205 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms