RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 CSMD3Q7Z407 3707 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 BET1O15155 118 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 SHOXO15266 292 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 RBMXL2O75526 392 aaKnown RBP8.05□□□□□ -1.12
RFFL-209ENST00000581265 TRBV12-3P01733 135 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 CD3GP09693 182 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 GSTT2P0CG29 244 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 GSTT2BP0CG30 244 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 RRASP10301 218 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 CLDN12P56749 244 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 RPS25P62851 125 aaKnown RBP8.05□□□□□ -1.12
RFFL-209ENST00000581265 PRSS8Q16651 343 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 RTL8BQ17RB0 113 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 RPEL1Q2QD12 228 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 LCN12Q6JVE5 192 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 LINC00322Q6ZN03 302 aaPredicted RBP8.05□□□□□ -1.12
RFFL-209ENST00000581265 GTSCR1Q86UQ5 136 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 Q8N402 240 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 ADAD2Q8NCV1 583 aaKnown RBP8.05□□□□□ -1.12
RFFL-209ENST00000581265 BVESQ8NE79 360 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 RAB3CQ96E17 227 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 CABLES2Q9BTV7 478 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 OR2D2Q9H210 308 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 DUSP21Q9H596 190 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 TUBA4BQ9H853 241 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 COA4Q9NYJ1 87 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 ADAM30Q9UKF2 790 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 RAB22AQ9UL26 194 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 V9GY05 133 aa8.05□□□□□ -1.12
RFFL-209ENST00000581265 TMEM272A0A1B0GTI8 110 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 IZUMO1RA6ND01 250 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 ERICH4A6NGS2 130 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 AIREO43918 545 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 FCGR3AP08637 254 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 OR9G9P0C7N8 305 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 HSMCR30P0CW71 290 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 CALRP27797 417 aaKnown RBP8.04□□□□□ -1.12
RFFL-209ENST00000581265 UBE2KP61086 200 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 MRPS15P82914 257 aaKnown RBP8.04□□□□□ -1.12
RFFL-209ENST00000581265 MLLT11Q13015 90 aaPredicted RBP8.04□□□□□ -1.12
RFFL-209ENST00000581265 CBX3Q13185 183 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 OR2K2Q8NGT1 345 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 C5orf30Q96GV9 206 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 ADTRPQ96IZ2 230 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 LYSTQ99698 3801 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 CENPOQ9BU64 300 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 VCXQ9H320 206 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 ACOT13Q9NPJ3 140 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 PEMTQ9UBM1 199 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 TPRKBQ9Y3C4 175 aa8.04□□□□□ -1.12
RFFL-209ENST00000581265 TRBV9A0A0B4J1U6 114 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 A0A0B4J203 849 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 SHISA3A0PJX4 238 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 FAM223BA6NKX1 122 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 RAB27BO00194 218 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 APELAP0DMC3 54 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 DUTP33316 252 aaKnown RBP8.03□□□□□ -1.12
RFFL-209ENST00000581265 FABP5Q01469 135 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 DEFA5Q01523 94 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 PLA2G7Q13093 441 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 VMA21Q3ZAQ7 101 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 Q6ZS49 121 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 FAM223AQ8IWN6 122 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 LAX1Q8IWV1 398 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 OR10R2Q8NGX6 335 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 OSR1Q8TAX0 266 aaPredicted RBP8.03□□□□□ -1.12
RFFL-209ENST00000581265 SRSF12Q8WXF0 261 aaKnown RBP8.03□□□□□ -1.12
RFFL-209ENST00000581265 PHB2Q99623 299 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 HIPK2Q9H2X6 1198 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 AKIP1Q9NQ31 210 aa8.03□□□□□ -1.12
RFFL-209ENST00000581265 ZNF230Q9UIE0 474 aaPredicted RBP8.03□□□□□ -1.12
RFFL-209ENST00000581265 LINC00473A8K010 186 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 ZNF785A8K8V0 405 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 BMPR1BO00238 502 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 MFNGO00587 321 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 RGS10O43665 173 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 CRYZL1O95825 349 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 HIST1H1DP16402 221 aaKnown RBP8.02□□□□□ -1.13
RFFL-209ENST00000581265 GNB3P16520 340 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 RHOGP84095 191 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 ZNF45Q02386 682 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 ATP5G2Q06055 141 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 TNXAQ16473 311 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 HES5Q5TA89 166 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 IDO2Q6ZQW0 420 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 H1FOOQ8IZA3 346 aaPredicted RBP8.02□□□□□ -1.13
RFFL-209ENST00000581265 TTC9CQ8N5M4 171 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 NECAP1Q8NC96 275 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 IL17DQ8TAD2 202 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 MGLLQ99685 303 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 SPIN2AQ99865 258 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 SPIN2BQ9BPZ2 258 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 RBM7Q9Y580 266 aaKnown RBP8.02□□□□□ -1.13
RFFL-209ENST00000581265 CEPT1Q9Y6K0 416 aa8.02□□□□□ -1.13
RFFL-209ENST00000581265 HYDINQ4G0P3 5121 aa8.01□□□□□ -1.13
RFFL-209ENST00000581265 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.01□□□□□ -1.13
RFFL-209ENST00000581265 TRAV1-2A0A0B4J238 106 aa8.01□□□□□ -1.13
RFFL-209ENST00000581265 MPPED1O15442 326 aa8.01□□□□□ -1.13
RFFL-209ENST00000581265 CREBL2O60519 120 aaPredicted RBP8.01□□□□□ -1.13
RFFL-209ENST00000581265 RAB6AP20340 208 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms