RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KCNIP1Q9NZI2 227 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 RABL2AQ9UBK7 228 aaPredicted RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 ZNF221Q9UK13 617 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 RABL2BQ9UNT1 228 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 MRPS7Q9Y2R9 242 aaKnown RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 OR2W1Q9Y3N9 320 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 AMMECR1Q9Y4X0 333 aaPredicted RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 HILPDAQ9Y5L2 63 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 IGHV3-72A0A0B4J1Y9 119 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 A0A1B0GW64 132 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 FABP12A6NFH5 140 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 SRRM4A7MD48 611 aaKnown RBP2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 TOR1AO14656 332 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 RAB29O14966 203 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 PLA2G10O15496 165 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 TXNL1O43396 289 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 RGS11O94810 467 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 OR2F2O95006 317 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 IGKV1D-33P01593 117 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 IGKV1-33P01594 117 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 IGKV1-39P01597 117 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 PMP2P02689 132 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 GAPDHP04406 335 aaKnown RBP2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 IGKV1-16P04430 117 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 IGKV1D-39P04432 117 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 CTXN2P0C2S0 81 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 P0C879 139 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 HKR1P10072 659 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 IL7P13232 177 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 TBPP20226 339 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 HLA-DMAP28067 261 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 CD1BP29016 333 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 FCGR2CP31995 323 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 TALDO1P37837 337 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 CEACAM3P40198 252 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 CRIP2P52943 208 aaPredicted RBP2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 F2RL1P55085 397 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 UCP3P55916 312 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 PROK1P58294 105 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 TAS2R46P59540 309 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 ACTBP60709 375 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 RPL15P61313 204 aaKnown RBP2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 ACTG1P63261 375 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 NDPQ00604 133 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 BAMBIQ13145 260 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 IL18Q14116 193 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 LY6EQ16553 131 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 ZNF585BQ52M93 769 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 TMEM177Q53S58 311 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 STEAP1BQ6NZ63 245 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 C16orf87Q6PH81 154 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 C11orf88Q6PI97 169 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 FAM131AQ6UXB0 335 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 TMEM219Q86XT9 240 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 TGIF2LXQ8IUE1 241 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 ARRDC1Q8N5I2 433 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 DRAXINQ8NBI3 349 aaPredicted RBP2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 BVESQ8NE79 360 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 NPBQ8NG41 125 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 OR10X1Q8NGY0 326 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 OR10J5Q8NHC4 309 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 ZNF418Q8TF45 676 aaPredicted RBP2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 FCAMRQ8WWV6 532 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 RPEQ96AT9 228 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 CREB3L1Q96BA8 519 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 PHF21AQ96BD5 680 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 RBM14Q96PK6 669 aaKnown RBP2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 HSPB9Q9BQS6 159 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 RSRP1Q9BUV0 290 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 GHITMQ9H3K2 345 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 C16orf95Q9H693 158 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 RANBP3Q9H6Z4 567 aaPredicted RBP2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 RAB9BQ9NP90 201 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 NECAP2Q9NVZ3 263 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 EHFQ9NZC4 300 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 PIPOXQ9P0Z9 390 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 ZNF580Q9UK33 172 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 RNF150Q9ULK6 438 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 TBC1D24Q9ULP9 559 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 FBXO7Q9Y3I1 522 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 MMP24Q9Y5R2 645 aa2.99□□□□□ -1.93
SMARCE1-215ENST00000578995 DNAH3Q8TD57 4116 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 TRRAPQ9Y4A5 3859 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 SH2D7A6NKC9 451 aaPredicted RBP2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 CGB1A6NKQ9 187 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 LINC01548A6NM66 108 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 J3QRK9 145 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 M0R1X1 148 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 RBFOX2O43251 390 aaKnown RBP eCLIP2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 HSPA12AO43301 675 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 FGF16O43320 207 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 RAMP3O60896 148 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 PGLYRP1O75594 196 aaPredicted RBP2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 RBBP9O75884 186 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 AKAIN1P0CW23 69 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 EGR2P11161 476 aaPredicted RBP2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 MDKP21741 143 aaPredicted RBP2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 CD40LGP29965 261 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 GPR12P47775 334 aa2.98□□□□□ -1.93
SMARCE1-215ENST00000578995 LUMP51884 338 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms