RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 SIGLEC5O15389 551 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 ADAM20O43506 726 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 SPRY3O43610 288 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 NDUFA2O43678 99 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 MED6O75586 246 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 CLDN14O95500 239 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 IGKV1-39P01597 117 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 IGKV1D-39P04432 117 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 OR4A8P0C604 315 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 IRF2P14316 349 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 EGR1P18146 543 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 M6PRP20645 277 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 ZP3P21754 424 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 KIR2DS2P43631 304 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 GABRA2P47869 451 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 CEBPDP49716 269 aaPredicted RBP3.99□□□□□ -1.77
IFT20-205ENST00000578009 RAB7AP51149 207 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 RPL23AP62750 156 aaKnown RBP3.99□□□□□ -1.77
IFT20-205ENST00000578009 BSPH1Q075Z2 132 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 ZNF266Q14584 549 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 TWIST1Q15672 202 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 Q3ZCU0 254 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 AARDQ4LEZ3 155 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 CXorf66Q5JRM2 361 aaPredicted RBP3.99□□□□□ -1.77
IFT20-205ENST00000578009 RPL7L1Q6DKI1 246 aaKnown RBP3.99□□□□□ -1.77
IFT20-205ENST00000578009 C5orf24Q7Z6I8 188 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 CCDC28AQ8IWP9 274 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 COMMD1Q8N668 190 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 OR13A1Q8NGR1 328 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 LYPD6BQ8NI32 183 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 MRGPRDQ8TDS7 321 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 TMED6Q8WW62 240 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 RNASE6Q93091 150 aaKnown RBP3.99□□□□□ -1.77
IFT20-205ENST00000578009 GPR146Q96CH1 333 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 WFIKKN1Q96NZ8 548 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 AGMATQ9BSE5 352 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 ZNF665Q9H7R5 613 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 OR2S2Q9NQN1 319 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 PARP11Q9NR21 331 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 TAS2R3Q9NYW6 316 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 CLN8Q9UBY8 286 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 FBXL17Q9UF56 701 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 NDRG3Q9UGV2 375 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 NUP50Q9UKX7 468 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 PPP1R3CQ9UQK1 317 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 RCL1Q9Y2P8 373 aaKnown RBP3.99□□□□□ -1.77
IFT20-205ENST00000578009 STRAPQ9Y3F4 350 aaKnown RBP3.99□□□□□ -1.77
IFT20-205ENST00000578009 WSB1Q9Y6I7 421 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 CACNA1AO00555 2505 aa3.99□□□□□ -1.77
IFT20-205ENST00000578009 ANKHD1Q8IWZ3 2542 aaKnown RBP3.98□□□□□ -1.77
IFT20-205ENST00000578009 WDFY3Q8IZQ1 3526 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 TRGV10A0A0A0MS01 117 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 TRAV39A0A0B4J263 110 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 IGHV3-64DA0A0J9YX35 117 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 ZNF729A6NN14 1252 aaPredicted RBP3.98□□□□□ -1.77
IFT20-205ENST00000578009 SHISA9B4DS77 424 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 UMAD1C9J7I0 102 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 TOR1AO14656 332 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 TNFRSF13BO14836 293 aaPredicted RBP3.98□□□□□ -1.77
IFT20-205ENST00000578009 SYNGR2O43760 224 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 CHST1O43916 411 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 ZG16O60844 167 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 DFFBO76075 338 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 CLDN1O95832 211 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 SCGB1D2O95969 90 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 IGKV1-5P01602 117 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 OR8U8P0C7N1 319 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 DANCRP0C864 163 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 SPP1P10451 314 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 MALP21145 153 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 PPP1CCP36873 323 aaKnown RBP3.98□□□□□ -1.77
IFT20-205ENST00000578009 LPAR6P43657 344 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 CAV2P51636 162 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 PAX9P55771 341 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 LOXL3P58215 753 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 POLR2GP62487 172 aaKnown RBP eCLIP3.98□□□□□ -1.77
IFT20-205ENST00000578009 VAMP2P63027 116 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 EWSR1Q01844 656 aaKnown RBP eCLIP3.98□□□□□ -1.77
IFT20-205ENST00000578009 PJVKQ0ZLH3 352 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 MORN2Q502X0 79 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 PRR30Q53SZ7 412 aaPredicted RBP3.98□□□□□ -1.77
IFT20-205ENST00000578009 FAM74A1Q5RGS3 127 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 BTNL8Q6UX41 500 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 FOXRED2Q8IWF2 684 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 SPAG16Q8N0X2 631 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 FGFRL1Q8N441 504 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 PRR18Q8N4B5 295 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 TMEM252Q8N6L7 170 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 C8orf31Q8N9H6 132 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 OR52L2PQ8NGH6 319 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 OR51H1Q8NH63 302 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 GNPNAT1Q96EK6 184 aaPredicted RBP3.98□□□□□ -1.77
IFT20-205ENST00000578009 ADTRPQ96IZ2 230 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 CXorf58Q96LI9 332 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 CIB3Q96Q77 187 aaPredicted RBP3.98□□□□□ -1.77
IFT20-205ENST00000578009 TSNAXQ99598 290 aaKnown RBP3.98□□□□□ -1.77
IFT20-205ENST00000578009 PARD6GQ9BYG4 376 aaPredicted RBP3.98□□□□□ -1.77
IFT20-205ENST00000578009 PARP12Q9H0J9 701 aaKnown RBP3.98□□□□□ -1.77
IFT20-205ENST00000578009 OR2D2Q9H210 308 aa3.98□□□□□ -1.77
IFT20-205ENST00000578009 MMP26Q9NRE1 261 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms