RNA–Protein interactions for RNA: ENST00000576241.1

CCDC40-216, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 714 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-216ENST00000576241 SDHAF2Q9NX18 166 aa10.54□□□□□ -0.72
CCDC40-216ENST00000576241 MFNGO00587 321 aa10.53□□□□□ -0.72
CCDC40-216ENST00000576241 SHOXO15266 292 aa10.53□□□□□ -0.72
CCDC40-216ENST00000576241 RRASP10301 218 aa10.53□□□□□ -0.72
CCDC40-216ENST00000576241 ZP3P21754 424 aa10.53□□□□□ -0.72
CCDC40-216ENST00000576241 PJVKQ0ZLH3 352 aa10.53□□□□□ -0.72
CCDC40-216ENST00000576241 ARL6IP1Q15041 203 aa10.53□□□□□ -0.72
CCDC40-216ENST00000576241 BVESQ8NE79 360 aa10.53□□□□□ -0.72
CCDC40-216ENST00000576241 TMEM68Q96MH6 324 aa10.53□□□□□ -0.72
CCDC40-216ENST00000576241 RSRP1Q9BUV0 290 aa10.53□□□□□ -0.72
CCDC40-216ENST00000576241 RANGRFQ9HD47 186 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-216ENST00000576241 ZNF230Q9UIE0 474 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-216ENST00000576241 STUB1Q9UNE7 303 aa10.53□□□□□ -0.72
CCDC40-216ENST00000576241 TRDV1A0A1B0GX56 115 aa10.52□□□□□ -0.73
CCDC40-216ENST00000576241 RAB27BO00194 218 aa10.52□□□□□ -0.73
CCDC40-216ENST00000576241 IGLV2-23P01705 113 aa10.52□□□□□ -0.73
CCDC40-216ENST00000576241 GALP22466 123 aa10.52□□□□□ -0.73
CCDC40-216ENST00000576241 TMEM177Q53S58 311 aa10.52□□□□□ -0.73
CCDC40-216ENST00000576241 OVCH2Q7RTZ1 564 aa10.52□□□□□ -0.73
CCDC40-216ENST00000576241 ANKRD13BQ86YJ7 626 aa10.52□□□□□ -0.73
CCDC40-216ENST00000576241 SBSPONQ8IVN8 264 aa10.52□□□□□ -0.73
CCDC40-216ENST00000576241 ADTRPQ96IZ2 230 aa10.52□□□□□ -0.73
CCDC40-216ENST00000576241 PHB2Q99623 299 aa10.52□□□□□ -0.73
CCDC40-216ENST00000576241 ATG5Q9H1Y0 275 aa10.52□□□□□ -0.73
CCDC40-216ENST00000576241 COA4Q9NYJ1 87 aa10.52□□□□□ -0.73
CCDC40-216ENST00000576241 A0A0B4J203 849 aa10.51□□□□□ -0.73
CCDC40-216ENST00000576241 SHISA3A0PJX4 238 aa10.51□□□□□ -0.73
CCDC40-216ENST00000576241 ANKRD34BA5PLL1 514 aa10.51□□□□□ -0.73
CCDC40-216ENST00000576241 CRYGBP07316 175 aa10.51□□□□□ -0.73
CCDC40-216ENST00000576241 FRMD6-AS1P0C7T7 363 aa10.51□□□□□ -0.73
CCDC40-216ENST00000576241 AADACP22760 399 aa10.51□□□□□ -0.73
CCDC40-216ENST00000576241 SSBP2P81877 361 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-216ENST00000576241 SRSF7Q16629 238 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCDC40-216ENST00000576241 VMA21Q3ZAQ7 101 aa10.51□□□□□ -0.73
CCDC40-216ENST00000576241 C22orf42Q6IC83 251 aa10.51□□□□□ -0.73
CCDC40-216ENST00000576241 RCHY1Q96PM5 261 aa10.51□□□□□ -0.73
CCDC40-216ENST00000576241 TRIM64CA6NLI5 447 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 MPPED1O15442 326 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 BRI3O95415 125 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 CRYZL1O95825 349 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 DTYMKP23919 212 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 GABARAPL2P60520 117 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 TNXAQ16473 311 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 Q6ZS49 121 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 HAPLN4Q86UW8 402 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 H1FOOQ8IZA3 346 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-216ENST00000576241 TEX45Q8NA69 505 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 TINAGL1Q9GZM7 467 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-216ENST00000576241 ZMAT4Q9H898 229 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 RAB26Q9ULW5 256 aa10.5□□□□□ -0.73
CCDC40-216ENST00000576241 RYR1P21817 5038 aa10.49□□□□□ -0.73
CCDC40-216ENST00000576241 SRRM4A7MD48 611 aaKnown RBP10.49□□□□□ -0.73
CCDC40-216ENST00000576241 CREBL2O60519 120 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-216ENST00000576241 MRPS14O60783 128 aaKnown RBP10.49□□□□□ -0.73
CCDC40-216ENST00000576241 ACTL6BO94805 426 aa10.49□□□□□ -0.73
CCDC40-216ENST00000576241 IGLV1-51P01701 117 aa10.49□□□□□ -0.73
CCDC40-216ENST00000576241 APELAP0DMC3 54 aa10.49□□□□□ -0.73
CCDC40-216ENST00000576241 DUTP33316 252 aaKnown RBP10.49□□□□□ -0.73
CCDC40-216ENST00000576241 UBE2KP61086 200 aa10.49□□□□□ -0.73
CCDC40-216ENST00000576241 KLF5Q13887 457 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-216ENST00000576241 TATDN3Q17R31 274 aa10.49□□□□□ -0.73
CCDC40-216ENST00000576241 CDNFQ49AH0 187 aa10.49□□□□□ -0.73
CCDC40-216ENST00000576241 OSR1Q8TAX0 266 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-216ENST00000576241 ACOT12Q8WYK0 555 aa10.49□□□□□ -0.73
CCDC40-216ENST00000576241 USMG5Q96IX5 58 aa10.49□□□□□ -0.73
CCDC40-216ENST00000576241 ST6GALNAC5Q9BVH7 336 aa10.49□□□□□ -0.73
CCDC40-216ENST00000576241 PEF1Q9UBV8 284 aaKnown RBP10.49□□□□□ -0.73
CCDC40-216ENST00000576241 SORL1Q92673 2214 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 SMIM30A4D0T7 59 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 MSGN1A6NI15 193 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 NOTOA8MTQ0 251 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 SCGNO76038 276 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 CTXN2P0C2S0 81 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 OR9G9P0C7N8 305 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 LYL1P12980 280 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 CD36P16671 472 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 PSMB9P28065 219 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 SYNJ2BPP57105 145 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 DEFA5Q01523 94 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 PRSS8Q16651 343 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 HACD4Q5VWC8 232 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 ZNF343Q6P1L6 599 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 IDO2Q6ZQW0 420 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 NR2C2APQ86WQ0 139 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 SGPP2Q8IWX5 399 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 ZNF645Q8N7E2 425 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 OR9G4Q8NGQ1 327 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 DDB2Q92466 427 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 DCUN1D5Q9BTE7 237 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 PALMDQ9NP74 551 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 ELF5Q9UKW6 265 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-216ENST00000576241 MRPS7Q9Y2R9 242 aaKnown RBP10.48□□□□□ -0.73
CCDC40-216ENST00000576241 PRELID3BQ9Y3B1 194 aa10.48□□□□□ -0.73
CCDC40-216ENST00000576241 IGKV1D-8A0A087WSZ0 117 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 LINC00473A8K010 186 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 H0Y980 276 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 J3QRK9 145 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 IGHV4-30-4P0DP06 118 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 FGF9P31371 208 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms