RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 MDKP21741 143 aaPredicted RBP13.47□□□□□ -0.25
POLR2A-201ENST00000572844 LINC00205P59089 165 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 SPCS3P61009 180 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 TBR1Q16650 682 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 AKIRIN2Q53H80 203 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 FAM201AQ5SY85 155 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 GFRALQ6UXV0 394 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 HIST1H2BAQ96A08 127 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 S1PR3Q99500 378 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 DOCK11Q5JSL3 2073 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 NDUFA2O43678 99 aa13.46□□□□□ -0.25
POLR2A-201ENST00000572844 BCL2P10415 239 aa13.46□□□□□ -0.25
POLR2A-201ENST00000572844 NQO2P16083 231 aa13.46□□□□□ -0.25
POLR2A-201ENST00000572844 TNFRSF1AP19438 455 aa13.46□□□□□ -0.25
POLR2A-201ENST00000572844 MAS1LP35410 378 aa13.46□□□□□ -0.25
POLR2A-201ENST00000572844 RAB13P51153 203 aa13.46□□□□□ -0.25
POLR2A-201ENST00000572844 ERVK-16P61578 105 aa13.46□□□□□ -0.25
POLR2A-201ENST00000572844 RPP30P78346 268 aaKnown RBP13.46□□□□□ -0.25
POLR2A-201ENST00000572844 ZDHHC16Q969W1 377 aa13.46□□□□□ -0.25
POLR2A-201ENST00000572844 ADTRPQ96IZ2 230 aa13.46□□□□□ -0.25
POLR2A-201ENST00000572844 P2RX4Q99571 388 aa13.46□□□□□ -0.25
POLR2A-201ENST00000572844 QTRT1Q9BXR0 403 aaKnown RBP13.46□□□□□ -0.25
POLR2A-201ENST00000572844 KLF2Q9Y5W3 355 aaPredicted RBP13.46□□□□□ -0.25
POLR2A-201ENST00000572844 FRYQ5TBA9 3013 aa13.46□□□□□ -0.25
POLR2A-201ENST00000572844 DPRXA6NFQ7 191 aa13.46□□□□□ -0.26
POLR2A-201ENST00000572844 H3BQ15 152 aa13.46□□□□□ -0.26
POLR2A-201ENST00000572844 K7ENP7 123 aa13.46□□□□□ -0.26
POLR2A-201ENST00000572844 RBMXL2O75526 392 aaKnown RBP13.46□□□□□ -0.26
POLR2A-201ENST00000572844 TSPAN9O75954 239 aa13.46□□□□□ -0.26
POLR2A-201ENST00000572844 CYB5R3P00387 301 aaPredicted RBP13.46□□□□□ -0.26
POLR2A-201ENST00000572844 RPL39P5Q59GN2 51 aa13.46□□□□□ -0.26
POLR2A-201ENST00000572844 OR4S2Q8NH73 311 aa13.46□□□□□ -0.26
POLR2A-201ENST00000572844 DCHS1Q96JQ0 3298 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 A0A087WWC5 75 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 NDUFS6O75380 124 aaKnown RBP13.45□□□□□ -0.26
POLR2A-201ENST00000572844 ARG1P05089 322 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 THBDP07204 575 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 SELLP14151 372 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 AKR1C3P42330 323 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 THBS3P49746 956 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 ADIPOQQ15848 244 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 CT45A1Q5HYN5 189 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 PRAMEF5Q5TYX0 476 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 SLC35E3Q7Z769 313 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 WFDC8Q8IUA0 241 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 CYB561D1Q8N8Q1 229 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 ZNF439Q8NDP4 499 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 OR4A16Q8NH70 328 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 CT45A3Q8NHU0 189 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 C20orf24Q9BUV8 137 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 IDI2-AS1Q9NZ38 188 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 GNG13Q9P2W3 67 aa13.45□□□□□ -0.26
POLR2A-201ENST00000572844 PUS1Q9Y606 427 aaKnown RBP eCLIP13.45□□□□□ -0.26
POLR2A-201ENST00000572844 PLCE1Q9P212 2302 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 C15orf62A8K5M9 175 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 C17orf100A8MU93 164 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 SOX15O60248 233 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 IFNA1P01562 189 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 FOXC1Q12948 553 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 LCN15Q6UWW0 184 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 TCF23Q7RTU1 214 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 ZNF429Q86V71 674 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 BIN3Q9NQY0 253 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 CFAP47Q6ZTR5 3102 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 AKAP13Q12802 2813 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 MAP1LC3B2A6NCE7 125 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 SLC31A2O15432 143 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 RELBQ01201 579 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 SSX7Q7RTT5 188 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 OR10A7Q8NGE5 316 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 TVP23CQ96ET8 276 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 CCL13Q99616 98 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 ZNF251Q9BRH9 671 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 GGACTQ9BVM4 153 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 MAP1LC3BQ9GZQ8 125 aa13.44□□□□□ -0.26
POLR2A-201ENST00000572844 FGF7P21781 194 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 TAGLN2P37802 199 aaKnown RBP13.43□□□□□ -0.26
POLR2A-201ENST00000572844 VDAC2P45880 294 aaPredicted RBP13.43□□□□□ -0.26
POLR2A-201ENST00000572844 ACSM6Q6P461 480 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 RPP25LQ8N5L8 163 aaKnown RBP13.43□□□□□ -0.26
POLR2A-201ENST00000572844 MALSU1Q96EH3 234 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 PLPPR2Q96GM1 343 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 NIPSNAP3BQ9BS92 247 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 SLC39A9Q9NUM3 307 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 VAX2Q9UIW0 290 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 TET2Q6N021 2002 aaPredicted RBP13.43□□□□□ -0.26
POLR2A-201ENST00000572844 CTXND1A0A1B0GTU2 59 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 NKX6-3A6NJ46 265 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 VSTM5A8MXK1 200 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 C17orf112F2Z3M2 114 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 IFNA17P01571 189 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 GYPAP02724 150 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 OR4A8P0C604 315 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 ELLP55199 621 aaPredicted RBP13.43□□□□□ -0.26
POLR2A-201ENST00000572844 RAB5BP61020 215 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 NHLH1Q02575 133 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 BSPH1Q075Z2 132 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 POU2AF1Q16633 256 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 DUX4L9Q6RFH8 374 aaPredicted RBP13.43□□□□□ -0.26
POLR2A-201ENST00000572844 RAB39BQ96DA2 213 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms