RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 GALP22466 123 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 PSMB8P28062 276 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 FGF9P31371 208 aaPredicted RBP7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 TGFBR1P36897 503 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 CDX1P47902 265 aaPredicted RBP7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 LSM3P62310 102 aaKnown RBP7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 RTL8BQ17RB0 113 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 ZNF260Q3ZCT1 412 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 ACTBL2Q562R1 376 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 LFNGQ8NES3 379 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 OR5AN1Q8NGI8 311 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 OR1N2Q8NGR9 330 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 ARPC1AQ92747 370 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 PRR25Q96S07 402 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 PHB2Q99623 299 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 DCUN1D5Q9BTE7 237 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 CENPOQ9BU64 300 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 YTHDF1Q9BYJ9 559 aaKnown RBP7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 SDHAF2Q9NX18 166 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 RHBDL2Q9NX52 303 aa7.88□□□□□ -1.15
GTF3C1-206ENST00000566779 SORL1Q92673 2214 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 TRAV18A0A075B6X5 111 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 TRBV6-7A0A0A0MS04 114 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 TUSC2O75896 110 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 CRYZL1O95825 349 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 H2AFB1P0C5Y9 115 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 H2AFB2P0C5Z0 115 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 NFYAP23511 347 aaPredicted RBP7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 RAB9AP51151 201 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 SLURP1P55000 103 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 ARPC4P59998 168 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 DGCR2P98153 550 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 FXYD3Q14802 87 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 ARL6IP1Q15041 203 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 ZNF660Q6AZW8 331 aaPredicted RBP7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 IDO2Q6ZQW0 420 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 TPRA1Q86W33 373 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 OR5H6Q8NGV6 325 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 ACOT12Q8WYK0 555 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 PTX4Q96A99 478 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 C5orf30Q96GV9 206 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 GHITMQ9H3K2 345 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 VCX3AQ9NNX9 186 aa7.87□□□□□ -1.15
GTF3C1-206ENST00000566779 MEIS3P1A6NDR6 274 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 MPPED1O15442 326 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 SOX15O60248 233 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 PROP1O75360 226 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 SPDEFO95238 335 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 TRGV3P03979 118 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 OR8U8P0C7N1 319 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 PTHLHP12272 177 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 DTYMKP23919 212 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 CD40LGP29965 261 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 PPIFP30405 207 aaKnown RBP7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 ZNF616Q08AN1 781 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 TMEM267Q0VDI3 215 aaPredicted RBP7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 PJVKQ0ZLH3 352 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 TNXAQ16473 311 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 KCTD21Q4G0X4 260 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 C9orf66Q5T8R8 295 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 HACD4Q5VWC8 232 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 H1FOOQ8IZA3 346 aaPredicted RBP7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 ZNF491Q8N8L2 437 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 OR5T1Q8NG75 326 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 UBE2E2Q96LR5 201 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 COA4Q9NYJ1 87 aa7.86□□□□□ -1.15
GTF3C1-206ENST00000566779 PRKDCP78527 4128 aaKnown RBP7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 IGHV4OR15-8A0A075B7B6 117 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 A0A087WW49 117 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 ARPC1BO15143 372 aaKnown RBP7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 FCGR3BO75015 233 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 SAP30O75446 220 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 SCGNO76038 276 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 CD69Q07108 199 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 VMA21Q3ZAQ7 101 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 KCTD9Q7L273 389 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 Q8N1Y9 231 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 RNF152Q8N8N0 203 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 MINDY2Q8NBR6 621 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 TCTEX1D2Q8WW35 142 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 SLC25A38Q96DW6 304 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 ZNF580Q9UK33 172 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 SPATA2Q9UM82 520 aa7.85□□□□□ -1.15
GTF3C1-206ENST00000566779 IGKV1D-13A0A0B4J2D9 117 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 C13orf42A0A1B0GVH6 325 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 LINC00473A8K010 186 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 LINC01619G3V211 115 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 ZNF561-AS1K7EIQ3 104 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 OVOL1O14753 267 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 AIREO43918 545 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 SSX5O60225 188 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 SCGB1D2O95969 90 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 IGLV2-23P01705 113 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 LGALS1P09382 135 aaKnown RBP7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 IGKV1-13P0DP09 117 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 EGR2P11161 476 aaPredicted RBP7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 FXYD4P59646 89 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 PITPNAQ00169 270 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 EGFEM1PQ0D2K5 195 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms