RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 POTEKPQ9BYX7 375 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 NSRP1Q9H0G5 558 aaKnown RBP2.74□□□□□ -1.97
CNOT1-209ENST00000566240 ALX4Q9H161 411 aaPredicted RBP2.74□□□□□ -1.97
CNOT1-209ENST00000566240 OR2D2Q9H210 308 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 TMEM216Q9P0N5 145 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 SNX12Q9UMY4 172 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 UTP11Q9Y3A2 253 aaKnown RBP2.74□□□□□ -1.97
CNOT1-209ENST00000566240 MTCH2Q9Y6C9 303 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 MYH10P35580 1976 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 ANK1P16157 1881 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 PDCD11Q14690 1871 aaKnown RBP2.73□□□□□ -1.97
CNOT1-209ENST00000566240 GPR179Q6PRD1 2367 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 A0A0B4J2C4 111 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 F5H768 121 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 H3BMM0 161 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 RTL8CO15255 209 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 BIRC5O15392 142 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 LTAP01374 205 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 CALB1P05937 261 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 INAFM2P0DMQ5 153 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 COX5BP10606 129 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 CD99P14209 185 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 PRPS1L1P21108 318 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 CFL1P23528 166 aaKnown RBP2.73□□□□□ -1.97
CNOT1-209ENST00000566240 HES3Q5TGS1 186 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 ZNF660Q6AZW8 331 aaPredicted RBP2.73□□□□□ -1.97
CNOT1-209ENST00000566240 WDR59Q6PJI9 974 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 Q6ZQT7 251 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 CPNE9Q8IYJ1 553 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 TMEM156Q8N614 296 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 PPTC7Q8NI37 304 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 UBE2WQ96B02 151 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 PPCDCQ96CD2 204 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 TAS2R1Q9NYW7 299 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 GLS2Q9UI32 602 aa2.73□□□□□ -1.97
CNOT1-209ENST00000566240 ZNF230Q9UIE0 474 aaPredicted RBP2.73□□□□□ -1.97
CNOT1-209ENST00000566240 YLPM1P49750 1951 aaKnown RBP2.72□□□□□ -1.97
CNOT1-209ENST00000566240 EP400Q96L91 3159 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 A0A087X0T9 212 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 TINCRA0A1B0GVN0 87 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 A6NED7 52 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 B4DEV8 164 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 ZNF189O75820 626 aaPredicted RBP2.72□□□□□ -1.97
CNOT1-209ENST00000566240 ARL6IP5O75915 188 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 IGLV3-19P01714 112 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 HLA-DRAP01903 254 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 FAM228BP0C875 321 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 OCM2P0CE71 109 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 UGT2B7P16662 529 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 PSMA1P25786 263 aaKnown RBP2.72□□□□□ -1.97
CNOT1-209ENST00000566240 CRABP2P29373 138 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 MAGEA2P43356 314 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 CDC34P49427 236 aaPredicted RBP2.72□□□□□ -1.97
CNOT1-209ENST00000566240 RWDD2BP57060 319 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 TFAMQ00059 246 aaKnown RBP2.72□□□□□ -1.97
CNOT1-209ENST00000566240 BCL2A1Q16548 175 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 KRTAP13-3Q3SY46 172 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 SLC36A2Q495M3 483 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 PDZD11Q5EBL8 140 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 DCUN1D2Q6PH85 259 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 SCGB1D4Q6XE38 83 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 CYHR1Q6ZMK1 362 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 FAM19A5Q7Z5A7 132 aaPredicted RBP2.72□□□□□ -1.97
CNOT1-209ENST00000566240 MMGT1Q8N4V1 131 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 TMEM35BQ8NCS4 154 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 BPIFB6Q8NFQ5 453 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 TNFAIP8L1Q8WVP5 186 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 OTUB2Q96DC9 234 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 SLC22A4Q9H015 551 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 UBQLN4Q9NRR5 601 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 KCNIP2Q9NS61 270 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 PARVAQ9NVD7 372 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 FAM206AQ9NX38 181 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 USE1Q9NZ43 259 aa2.72□□□□□ -1.97
CNOT1-209ENST00000566240 MYO16Q9Y6X6 1858 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 F5H5T6 163 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 IGHV3-53P01767 116 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 GUSBP08236 651 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 KRT7P08729 469 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 PAEPP09466 180 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 GABARAPL2P60520 117 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 DR1Q01658 176 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 CAV1Q03135 178 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 MGAT3Q09327 533 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 IGFBP7Q16270 282 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 TRMT12Q53H54 448 aaKnown RBP2.71□□□□□ -1.98
CNOT1-209ENST00000566240 SPATA31B1PQ5VZV4 182 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 EBLN2Q6P2I7 272 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 DOLPP1Q86YN1 238 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 OR11G2Q8NGC1 345 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 APOBEC3DQ96AK3 386 aaPredicted RBP2.71□□□□□ -1.98
CNOT1-209ENST00000566240 KCTD7Q96MP8 289 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 TRIB3Q96RU7 358 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 DHRS9Q9BPW9 319 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 BCL2L14Q9BZR8 327 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 FAM107BQ9H098 131 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 MS4A6AQ9H2W1 248 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 DUSP21Q9H596 190 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 XPNPEP1Q9NQW7 623 aa2.71□□□□□ -1.98
CNOT1-209ENST00000566240 GINS2Q9Y248 185 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms