RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 MAFIPQ8WZ33 124 aa14.31□□□□□ -0.12
ABCA3-204ENST00000566200 DDB2Q92466 427 aa14.31□□□□□ -0.12
ABCA3-204ENST00000566200 NKX1-2Q9UD57 310 aaPredicted RBP14.31□□□□□ -0.12
ABCA3-204ENST00000566200 V9GY05 133 aa14.31□□□□□ -0.12
ABCA3-204ENST00000566200 MFNGO00587 321 aa14.3□□□□□ -0.12
ABCA3-204ENST00000566200 SHOXO15266 292 aa14.3□□□□□ -0.12
ABCA3-204ENST00000566200 AADACP22760 399 aa14.3□□□□□ -0.12
ABCA3-204ENST00000566200 MLLT11Q13015 90 aaPredicted RBP14.3□□□□□ -0.12
ABCA3-204ENST00000566200 ADAD2Q8NCV1 583 aaKnown RBP14.3□□□□□ -0.12
ABCA3-204ENST00000566200 ISOC1Q96CN7 298 aa14.3□□□□□ -0.12
ABCA3-204ENST00000566200 RAB3CQ96E17 227 aa14.3□□□□□ -0.12
ABCA3-204ENST00000566200 VCXQ9H320 206 aa14.3□□□□□ -0.12
ABCA3-204ENST00000566200 COA4Q9NYJ1 87 aa14.3□□□□□ -0.12
ABCA3-204ENST00000566200 SIGLEC8Q9NYZ4 499 aa14.3□□□□□ -0.12
ABCA3-204ENST00000566200 ZNF230Q9UIE0 474 aaPredicted RBP14.3□□□□□ -0.12
ABCA3-204ENST00000566200 RAB22AQ9UL26 194 aa14.3□□□□□ -0.12
ABCA3-204ENST00000566200 SHISA3A0PJX4 238 aa14.29□□□□□ -0.12
ABCA3-204ENST00000566200 MSGN1A6NI15 193 aa14.29□□□□□ -0.12
ABCA3-204ENST00000566200 H0Y980 276 aa14.29□□□□□ -0.12
ABCA3-204ENST00000566200 PSMA1P25786 263 aaKnown RBP14.29□□□□□ -0.12
ABCA3-204ENST00000566200 MAP2K4P45985 399 aa14.29□□□□□ -0.12
ABCA3-204ENST00000566200 MECP2P51608 486 aaKnown RBP14.29□□□□□ -0.12
ABCA3-204ENST00000566200 AQP4P55087 323 aa14.29□□□□□ -0.12
ABCA3-204ENST00000566200 OR10J5Q8NHC4 309 aa14.29□□□□□ -0.12
ABCA3-204ENST00000566200 NRG4Q8WWG1 115 aa14.29□□□□□ -0.12
ABCA3-204ENST00000566200 SPATA25Q9BR10 227 aa14.29□□□□□ -0.12
ABCA3-204ENST00000566200 TPRKBQ9Y3C4 175 aa14.29□□□□□ -0.12
ABCA3-204ENST00000566200 IGKV1D-8A0A087WSZ0 117 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 LINC00473A8K010 186 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 RAB27BO00194 218 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 RGS10O43665 173 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 DIRAS3O95661 229 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 GNB3P16520 340 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 TNCP24821 2201 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 OR10A3P58181 314 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 PRSS8Q16651 343 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 ADAMTSL5Q6ZMM2 481 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 IDO2Q6ZQW0 420 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 OR10R2Q8NGX6 335 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 USMG5Q96IX5 58 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 MGLLQ99685 303 aa14.28□□□□□ -0.12
ABCA3-204ENST00000566200 ANKRD65E5RJM6 399 aa14.27□□□□□ -0.13
ABCA3-204ENST00000566200 OR9G9P0C7N8 305 aa14.27□□□□□ -0.13
ABCA3-204ENST00000566200 DUTP33316 252 aaKnown RBP14.27□□□□□ -0.13
ABCA3-204ENST00000566200 UBE2KP61086 200 aa14.27□□□□□ -0.13
ABCA3-204ENST00000566200 TAGLNQ01995 201 aaKnown RBP14.27□□□□□ -0.13
ABCA3-204ENST00000566200 ZNF45Q02386 682 aa14.27□□□□□ -0.13
ABCA3-204ENST00000566200 RTL8BQ17RB0 113 aa14.27□□□□□ -0.13
ABCA3-204ENST00000566200 RPEL1Q2QD12 228 aa14.27□□□□□ -0.13
ABCA3-204ENST00000566200 H1FOOQ8IZA3 346 aaPredicted RBP14.27□□□□□ -0.13
ABCA3-204ENST00000566200 TEX45Q8NA69 505 aa14.27□□□□□ -0.13
ABCA3-204ENST00000566200 SRSF12Q8WXF0 261 aaKnown RBP14.27□□□□□ -0.13
ABCA3-204ENST00000566200 ELF5Q9UKW6 265 aaPredicted RBP14.27□□□□□ -0.13
ABCA3-204ENST00000566200 BMPR1BO00238 502 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 OR2A4O95047 310 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 CRYZL1O95825 349 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 PRH1P02810 166 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 HIST1H1DP16402 221 aaKnown RBP14.26□□□□□ -0.13
ABCA3-204ENST00000566200 CRHBPP24387 322 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 MRPS15P82914 257 aaKnown RBP14.26□□□□□ -0.13
ABCA3-204ENST00000566200 SSX1Q16384 188 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 TNXAQ16473 311 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 LCN12Q6JVE5 192 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 LINC00322Q6ZN03 302 aaPredicted RBP14.26□□□□□ -0.13
ABCA3-204ENST00000566200 Q8N402 240 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 PHB2Q99623 299 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 CCDC90BQ9GZT6 254 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 ACOT13Q9NPJ3 140 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 AKIP1Q9NQ31 210 aa14.26□□□□□ -0.13
ABCA3-204ENST00000566200 A0A075B6Q4 140 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 TRBV9A0A0B4J1U6 114 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 A0A0B4J203 849 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 RRASP10301 218 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 PSMD7P51665 324 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 RHOGP84095 191 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 CBX3Q13185 183 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 VMA21Q3ZAQ7 101 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 Q6ZS49 121 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 PRSS48Q7RTY5 328 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 GTSCR1Q86UQ5 136 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 SNAPC3Q92966 411 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 RETNQ9HD89 108 aa14.25□□□□□ -0.13
ABCA3-204ENST00000566200 IFITM5A6NNB3 132 aa14.24□□□□□ -0.13
ABCA3-204ENST00000566200 SAA1P0DJI8 122 aaPredicted RBP14.24□□□□□ -0.13
ABCA3-204ENST00000566200 EXOSC2Q13868 293 aaKnown RBP14.24□□□□□ -0.13
ABCA3-204ENST00000566200 TATDN3Q17R31 274 aa14.24□□□□□ -0.13
ABCA3-204ENST00000566200 C10orf55Q5SWW7 151 aa14.24□□□□□ -0.13
ABCA3-204ENST00000566200 ACOT12Q8WYK0 555 aa14.24□□□□□ -0.13
ABCA3-204ENST00000566200 ADTRPQ96IZ2 230 aa14.24□□□□□ -0.13
ABCA3-204ENST00000566200 GINS4Q9BRT9 223 aa14.24□□□□□ -0.13
ABCA3-204ENST00000566200 TUBA4BQ9H853 241 aa14.24□□□□□ -0.13
ABCA3-204ENST00000566200 ZNF430Q9H8G1 570 aaPredicted RBP14.24□□□□□ -0.13
ABCA3-204ENST00000566200 RBM7Q9Y580 266 aaKnown RBP14.24□□□□□ -0.13
ABCA3-204ENST00000566200 DMRT1Q9Y5R6 373 aa14.24□□□□□ -0.13
ABCA3-204ENST00000566200 TRAV1-2A0A0B4J238 106 aa14.23□□□□□ -0.13
ABCA3-204ENST00000566200 FAM223BA6NKX1 122 aa14.23□□□□□ -0.13
ABCA3-204ENST00000566200 RAB6AP20340 208 aa14.23□□□□□ -0.13
ABCA3-204ENST00000566200 EDN2P20800 178 aa14.23□□□□□ -0.13
ABCA3-204ENST00000566200 GADD45AP24522 165 aa14.23□□□□□ -0.13
ABCA3-204ENST00000566200 NR2C2APQ86WQ0 139 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms