RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TGFAP01135 160 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 AVPP01185 164 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 IFNA21P01568 189 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 IGKV1-5P01602 117 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 GAPDHP04406 335 aaKnown RBP8.22□□□□□ -1.09
SMG1-208ENST00000563448 GIPP09681 153 aaPredicted RBP8.22□□□□□ -1.09
SMG1-208ENST00000563448 GATA3P23771 443 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 TCTE3Q8IZS6 198 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 OR5AN1Q8NGI8 311 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 CD300LFQ8TDQ1 290 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 SLC35D1Q9NTN3 355 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 IGHV1-3A0A0C4DH29 117 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 A0A1W2PPI3 338 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 VDAC1P21796 283 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 GZMKP49863 264 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 NMSQ5H8A3 153 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 DYNAPQ8N1N2 210 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 OR4S2Q8NH73 311 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 RPEQ96AT9 228 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 GPR146Q96CH1 333 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 AJUBAQ96IF1 538 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 C2orf50Q96LR7 162 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 PDCD10Q9BUL8 212 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 PLEKHA2Q9HB19 425 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 HILPDAQ9Y5L2 63 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 ZNF469Q96JG9 3925 aaPredicted RBP8.21□□□□□ -1.1
SMG1-208ENST00000563448 ABCA1O95477 2261 aa8.21□□□□□ -1.1
SMG1-208ENST00000563448 SETXQ7Z333 2677 aaKnown RBP8.2□□□□□ -1.1
SMG1-208ENST00000563448 G3V3Q6 166 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 CRYZL1O95825 349 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 KRASP01116 189 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 IGKV1-16P04430 117 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 P0C879 139 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 PAX6P26367 422 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 G6PCP35575 357 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 CEACAM3P40198 252 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 RAP2BP61225 183 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 IL15RAQ13261 267 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 IZUMO4Q1ZYL8 232 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 Q5BKY6 102 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 MINOS1Q5TGZ0 78 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 PIP4P2Q8N4L2 257 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 LSM10Q969L4 123 aaKnown RBP8.2□□□□□ -1.1
SMG1-208ENST00000563448 R3HDM4Q96D70 268 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 NMES1Q9C002 83 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 TBL2Q9Y4P3 447 aaKnown RBP8.2□□□□□ -1.1
SMG1-208ENST00000563448 MINOS1-NBL1R4GNA1 71 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 ITPR3Q14573 2671 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 MAP1AP78559 2803 aaPredicted RBP8.2□□□□□ -1.1
SMG1-208ENST00000563448 IGHV3OR16-10A0A075B7F0 116 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 IGHV3-72A0A0B4J1Y9 119 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 TRAV40A0A0B4J280 105 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 CYSRT1A8MQ03 144 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 SMAD7O15105 426 aaKnown RBP8.2□□□□□ -1.1
SMG1-208ENST00000563448 NPFFO15130 113 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 TXNL1O43396 289 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 APOA2P02652 100 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 RRASP10301 218 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 AKR1C2P52895 323 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 LGALS4P56470 323 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 TAGLNQ01995 201 aaKnown RBP8.2□□□□□ -1.1
SMG1-208ENST00000563448 RTL8BQ17RB0 113 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 IAH1Q2TAA2 248 aaPredicted RBP8.2□□□□□ -1.1
SMG1-208ENST00000563448 RUSC1-AS1Q66K80 236 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 CYB5R2Q6BCY4 276 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 Q6ZRM9 215 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 MOB3BQ86TA1 216 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 ASB13Q8WXK3 278 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 RANBP3Q9H6Z4 567 aaPredicted RBP8.2□□□□□ -1.1
SMG1-208ENST00000563448 COMMD9Q9P000 198 aa8.2□□□□□ -1.1
SMG1-208ENST00000563448 PIGBOS1A0A0B4J2F0 54 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 IGHV1-69DA0A0B4J2H0 117 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 MARCH11A6NNE9 402 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 H7C2Y5 167 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 J3QLI3 93 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 IGHV1-69P01742 117 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 IGHV4-38-2P0DP08 117 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 NQO2P16083 231 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 EPHA1P21709 976 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 MC5RP33032 325 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 SAA4P35542 130 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 SSX2Q16385 188 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 MIDNQ504T8 468 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 TMEM177Q53S58 311 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 KLF17Q5JT82 389 aaPredicted RBP8.19□□□□□ -1.1
SMG1-208ENST00000563448 DHRS7BQ6IAN0 325 aaPredicted RBP8.19□□□□□ -1.1
SMG1-208ENST00000563448 PDPNQ86YL7 162 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 VKORC1L1Q8N0U8 176 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 OR2T35Q8NGX2 323 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 RNASE11Q8TAA1 199 aaKnown RBP8.19□□□□□ -1.1
SMG1-208ENST00000563448 CFHR4Q92496 578 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 GSKIPQ9P0R6 139 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 WASHC3Q9Y3C0 194 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 MMP24Q9Y5R2 645 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 AKAP9Q99996 3911 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 TRAV14DV4A0A0A6YYC5 116 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 SRRM4A7MD48 611 aaKnown RBP8.19□□□□□ -1.1
SMG1-208ENST00000563448 TIMM23O14925 209 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 ATG12O94817 140 aa8.19□□□□□ -1.1
SMG1-208ENST00000563448 CYCSP99999 105 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms