RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 SCP2D1Q9UJQ7 156 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 TNFSF12O43508 249 aa13.01□□□□□ -0.33
USB1-206ENST00000562534 FCGR3BO75015 233 aa13.01□□□□□ -0.33
USB1-206ENST00000562534 PGLYRP1O75594 196 aaPredicted RBP13.01□□□□□ -0.33
USB1-206ENST00000562534 MDKP21741 143 aaPredicted RBP13.01□□□□□ -0.33
USB1-206ENST00000562534 RPL30P62888 115 aaKnown RBP13.01□□□□□ -0.33
USB1-206ENST00000562534 KLF9Q13886 244 aaPredicted RBP13.01□□□□□ -0.33
USB1-206ENST00000562534 TMEM177Q53S58 311 aa13.01□□□□□ -0.33
USB1-206ENST00000562534 AWAT1Q58HT5 328 aa13.01□□□□□ -0.33
USB1-206ENST00000562534 ARSJQ5FYB0 599 aaPredicted RBP13.01□□□□□ -0.33
USB1-206ENST00000562534 LIN54Q6MZP7 749 aa13.01□□□□□ -0.33
USB1-206ENST00000562534 C12orf54Q6X4T0 127 aa13.01□□□□□ -0.33
USB1-206ENST00000562534 FAM71E2Q8N5Q1 922 aa13.01□□□□□ -0.33
USB1-206ENST00000562534 POC5Q8NA72 575 aa13.01□□□□□ -0.33
USB1-206ENST00000562534 OSR1Q8TAX0 266 aaPredicted RBP13.01□□□□□ -0.33
USB1-206ENST00000562534 CD300LFQ8TDQ1 290 aa13.01□□□□□ -0.33
USB1-206ENST00000562534 ZNF486Q96H40 463 aaPredicted RBP13.01□□□□□ -0.33
USB1-206ENST00000562534 AIFM2Q9BRQ8 373 aa13.01□□□□□ -0.33
USB1-206ENST00000562534 ZNF702PQ9H963 129 aa13.01□□□□□ -0.33
USB1-206ENST00000562534 RNF114Q9Y508 228 aa13.01□□□□□ -0.33
USB1-206ENST00000562534 FBN1P35555 2871 aaKnown RBP13□□□□□ -0.33
USB1-206ENST00000562534 RRHO14718 337 aa13□□□□□ -0.33
USB1-206ENST00000562534 SHOXO15266 292 aa13□□□□□ -0.33
USB1-206ENST00000562534 NDUFA3O95167 84 aa13□□□□□ -0.33
USB1-206ENST00000562534 PGAM2P15259 253 aa13□□□□□ -0.33
USB1-206ENST00000562534 BAK1Q16611 211 aa13□□□□□ -0.33
USB1-206ENST00000562534 C9orf152Q5JTZ5 239 aa13□□□□□ -0.33
USB1-206ENST00000562534 TRIQKQ629K1 86 aa13□□□□□ -0.33
USB1-206ENST00000562534 ZNF57Q68EA5 555 aaPredicted RBP13□□□□□ -0.33
USB1-206ENST00000562534 TCTEX1D1Q8N7M0 179 aa13□□□□□ -0.33
USB1-206ENST00000562534 RBMXL1Q96E39 390 aaKnown RBP13□□□□□ -0.33
USB1-206ENST00000562534 SCGB3A2Q96PL1 93 aa13□□□□□ -0.33
USB1-206ENST00000562534 FXYD6Q9H0Q3 95 aa13□□□□□ -0.33
USB1-206ENST00000562534 HRASLSQ9HDD0 168 aa13□□□□□ -0.33
USB1-206ENST00000562534 AKIP1Q9NQ31 210 aa13□□□□□ -0.33
USB1-206ENST00000562534 MCUBQ9NWR8 336 aa13□□□□□ -0.33
USB1-206ENST00000562534 SLC2A8Q9NY64 477 aa13□□□□□ -0.33
USB1-206ENST00000562534 RBFOX2O43251 390 aaKnown RBP eCLIP12.99□□□□□ -0.33
USB1-206ENST00000562534 SPDEFO95238 335 aa12.99□□□□□ -0.33
USB1-206ENST00000562534 CRYZL1O95825 349 aa12.99□□□□□ -0.33
USB1-206ENST00000562534 CNTFRP26992 372 aa12.99□□□□□ -0.33
USB1-206ENST00000562534 PPP5CP53041 499 aa12.99□□□□□ -0.33
USB1-206ENST00000562534 PSG5Q15238 335 aa12.99□□□□□ -0.33
USB1-206ENST00000562534 SURF2Q15527 256 aaPredicted RBP12.99□□□□□ -0.33
USB1-206ENST00000562534 C5orf64Q2M2E5 130 aa12.99□□□□□ -0.33
USB1-206ENST00000562534 FAAP20Q6NZ36 180 aa12.99□□□□□ -0.33
USB1-206ENST00000562534 Q6ZS46 218 aa12.99□□□□□ -0.33
USB1-206ENST00000562534 SPAG16Q8N0X2 631 aa12.99□□□□□ -0.33
USB1-206ENST00000562534 OR51S1Q8NGJ8 323 aa12.99□□□□□ -0.33
USB1-206ENST00000562534 OR4S2Q8NH73 311 aa12.99□□□□□ -0.33
USB1-206ENST00000562534 SDHCQ99643 169 aaPredicted RBP12.99□□□□□ -0.33
USB1-206ENST00000562534 PEX14O75381 377 aa12.98□□□□□ -0.33
USB1-206ENST00000562534 IGHG2P01859 326 aa12.98□□□□□ -0.33
USB1-206ENST00000562534 CD40LGP29965 261 aa12.98□□□□□ -0.33
USB1-206ENST00000562534 PLGLAQ15195 96 aa12.98□□□□□ -0.33
USB1-206ENST00000562534 PHLDA2Q53GA4 152 aa12.98□□□□□ -0.33
USB1-206ENST00000562534 IDO2Q6ZQW0 420 aa12.98□□□□□ -0.33
USB1-206ENST00000562534 SPATA3Q8NHX4 192 aa12.98□□□□□ -0.33
USB1-206ENST00000562534 HARBI1Q96MB7 349 aa12.98□□□□□ -0.33
USB1-206ENST00000562534 GPHA2Q96T91 129 aa12.98□□□□□ -0.33
USB1-206ENST00000562534 NAP1L6A6NFF2 107 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 CENPXA8MT69 81 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 KCNAB3O43448 404 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 HPRT1P00492 218 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 HRASP01112 189 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 IL7P13232 177 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 F2RP25116 425 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 VDAC2P45880 294 aaPredicted RBP12.97□□□□□ -0.33
USB1-206ENST00000562534 PROK1P58294 105 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 BRWD1-AS2P59051 145 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 RND3P61587 244 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 ZNF846Q147U1 533 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 VMA21Q3ZAQ7 101 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 SLC35E3Q7Z769 313 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 FOXRED2Q8IWF2 684 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 C3orf56Q8N813 242 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 TEX45Q8NA69 505 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 OR51H1Q8NH63 302 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 MARCH1Q8TCQ1 289 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 CCDC32Q9BV29 185 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 WDR12Q9GZL7 423 aaKnown RBP12.97□□□□□ -0.33
USB1-206ENST00000562534 FBXL15Q9H469 300 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 SLC2A9Q9NRM0 540 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 FAM212BQ9NTI7 297 aaPredicted RBP12.97□□□□□ -0.33
USB1-206ENST00000562534 SERTAD4Q9NUC0 356 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 METTL1Q9UBP6 276 aaKnown RBP12.97□□□□□ -0.33
USB1-206ENST00000562534 GPR132Q9UNW8 380 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 C14orf166Q9Y224 244 aaKnown RBP12.97□□□□□ -0.33
USB1-206ENST00000562534 SIGLEC9Q9Y336 463 aa12.97□□□□□ -0.33
USB1-206ENST00000562534 SH2D7A6NKC9 451 aaPredicted RBP12.96□□□□□ -0.33
USB1-206ENST00000562534 SRRM4A7MD48 611 aaKnown RBP12.96□□□□□ -0.33
USB1-206ENST00000562534 HAX1O00165 279 aa12.96□□□□□ -0.33
USB1-206ENST00000562534 MPPED1O15442 326 aa12.96□□□□□ -0.33
USB1-206ENST00000562534 IGLV2-23P01705 113 aa12.96□□□□□ -0.33
USB1-206ENST00000562534 HLA-DRB1P01911 266 aa12.96□□□□□ -0.33
USB1-206ENST00000562534 RLN1P04808 185 aa12.96□□□□□ -0.33
USB1-206ENST00000562534 CTSDP07339 412 aaPredicted RBP12.96□□□□□ -0.33
USB1-206ENST00000562534 PIGPP57054 158 aa12.96□□□□□ -0.33
USB1-206ENST00000562534 OR2B11Q5JQS5 317 aa12.96□□□□□ -0.33
USB1-206ENST00000562534 TBC1D26Q86UD7 250 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms