RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 RANGRFQ9HD47 186 aaPredicted RBP8.89□□□□□ -0.99
USP3-220ENST00000561381 ZNF230Q9UIE0 474 aaPredicted RBP8.89□□□□□ -0.99
USP3-220ENST00000561381 TPRKBQ9Y3C4 175 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 V9GY05 133 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 TNCP24821 2201 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 TRBV6-7A0A0A0MS04 114 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 A0A0B4J203 849 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 SHISA3A0PJX4 238 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 H3BUA1 57 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 RGS10O43665 173 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 LYL1P12980 280 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 GNB3P16520 340 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 ZP3P21754 424 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 LGALS7P47929 136 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 SYNJ2BPP57105 145 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 DYRK1AQ13627 763 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 KLF5Q13887 457 aaPredicted RBP8.88□□□□□ -0.99
USP3-220ENST00000561381 TRAM1Q15629 374 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 ZFAND6Q6FIF0 208 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 ANKRD13BQ86YJ7 626 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 BVESQ8NE79 360 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 RAB3CQ96E17 227 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 CITED4Q96RK1 184 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 MGLLQ99685 303 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 CABLES2Q9BTV7 478 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 CCDC90BQ9GZT6 254 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 C19orf73Q9NVV2 129 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 RAB22AQ9UL26 194 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 DNAH7Q8WXX0 4024 aa8.88□□□□□ -0.99
USP3-220ENST00000561381 A0A075B6Q4 140 aa8.87□□□□□ -0.99
USP3-220ENST00000561381 A0A0G2JLM5 398 aa8.87□□□□□ -0.99
USP3-220ENST00000561381 SHOXO15266 292 aa8.87□□□□□ -0.99
USP3-220ENST00000561381 PSMA1P25786 263 aaKnown RBP8.87□□□□□ -0.99
USP3-220ENST00000561381 SERPINB10P48595 397 aa8.87□□□□□ -0.99
USP3-220ENST00000561381 SSX1Q16384 188 aa8.87□□□□□ -0.99
USP3-220ENST00000561381 IDO2Q6ZQW0 420 aa8.87□□□□□ -0.99
USP3-220ENST00000561381 OR9G4Q8NGQ1 327 aa8.87□□□□□ -0.99
USP3-220ENST00000561381 OR10J5Q8NHC4 309 aa8.87□□□□□ -0.99
USP3-220ENST00000561381 TINAGL1Q9GZM7 467 aaPredicted RBP8.87□□□□□ -0.99
USP3-220ENST00000561381 COA4Q9NYJ1 87 aa8.87□□□□□ -0.99
USP3-220ENST00000561381 IGKV1D-8A0A087WSZ0 117 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 KRTAP9-6A0A140TA67 174 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 MSGN1A6NI15 193 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 RAB27BO00194 218 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 MFNGO00587 321 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 CSN3P07498 182 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 CRHBPP24387 322 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 MRPS15P82914 257 aaKnown RBP8.86□□□□□ -0.99
USP3-220ENST00000561381 TMEM177Q53S58 311 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 ZNF343Q6P1L6 599 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 PRSS48Q7RTY5 328 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 SGPP2Q8IWX5 399 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 OR10R2Q8NGX6 335 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 DDB2Q92466 427 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 PALMDQ9NP74 551 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 ACOT13Q9NPJ3 140 aa8.86□□□□□ -0.99
USP3-220ENST00000561381 PEF1Q9UBV8 284 aaKnown RBP8.86□□□□□ -0.99
USP3-220ENST00000561381 ELF5Q9UKW6 265 aaPredicted RBP8.86□□□□□ -0.99
USP3-220ENST00000561381 RBM7Q9Y580 266 aaKnown RBP8.86□□□□□ -0.99
USP3-220ENST00000561381 IZUMO1RA6ND01 250 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 LINC00473A8K010 186 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 A8MZ25 164 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 J3QRK9 145 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 CRYZL1O95825 349 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 PRH1P02810 166 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 HIST1H1DP16402 221 aaKnown RBP8.85□□□□□ -0.99
USP3-220ENST00000561381 DUTP33316 252 aaKnown RBP8.85□□□□□ -0.99
USP3-220ENST00000561381 TNXAQ16473 311 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 PRSS8Q16651 343 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 RTL8BQ17RB0 113 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 H1FOOQ8IZA3 346 aaPredicted RBP8.85□□□□□ -0.99
USP3-220ENST00000561381 ADAD2Q8NCV1 583 aaKnown RBP8.85□□□□□ -0.99
USP3-220ENST00000561381 TMEM68Q96MH6 324 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 PHB2Q99623 299 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 GINS4Q9BRT9 223 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 THAP7Q9BT49 309 aaPredicted RBP8.85□□□□□ -0.99
USP3-220ENST00000561381 EDA2RQ9HAV5 297 aa8.85□□□□□ -0.99
USP3-220ENST00000561381 STARD9Q9P2P6 4700 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 SMIM30A4D0T7 59 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 IFITM5A6NNB3 132 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 BRI3O95415 125 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 AADACP22760 399 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 PSMD7P51665 324 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 UBE2KP61086 200 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 ZNF45Q02386 682 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 CBX3Q13185 183 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 HAGHQ16775 308 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 RPEL1Q2QD12 228 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 NR2C2APQ86WQ0 139 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 TEX45Q8NA69 505 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 SRSF12Q8WXF0 261 aaKnown RBP8.84□□□□□ -0.99
USP3-220ENST00000561381 USMG5Q96IX5 58 aa8.84□□□□□ -0.99
USP3-220ENST00000561381 TRAV1-2A0A0B4J238 106 aa8.83□□□□□ -1
USP3-220ENST00000561381 LCE6AA0A183 80 aa8.83□□□□□ -1
USP3-220ENST00000561381 H0Y980 276 aa8.83□□□□□ -1
USP3-220ENST00000561381 FAM229AH3BQW9 127 aa8.83□□□□□ -1
USP3-220ENST00000561381 PDCD5O14737 125 aa8.83□□□□□ -1
USP3-220ENST00000561381 DIRAS3O95661 229 aa8.83□□□□□ -1
USP3-220ENST00000561381 OR9G9P0C7N8 305 aa8.83□□□□□ -1
USP3-220ENST00000561381 RRASP10301 218 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms