RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	B9D2	Q9BPU9	175 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	CHCHD6	Q9BRQ6	235 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	GPR61	Q9BZJ8	451 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	OR2D2	Q9H210	308 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	TXNL4B	Q9NX01	149 aa	Known RBP	5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	SDHAF2	Q9NX18	166 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	METTL1	Q9UBP6	276 aa	Known RBP	5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	BLOC1S6	Q9UL45	172 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	MGAT4A	Q9UM21	535 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	VSIG4	Q9Y279	399 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	NUBP2	Q9Y5Y2	271 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	STARD9	Q9P2P6	4700 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	TRBV6-7	A0A0A0MS04	114 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	ANKRD34B	A5PLL1	514 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	PDCD5	O14737	125 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	SLC25A17	O43808	307 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	RBBP9	O75884	186 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	IGHV3-11	P01762	117 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	TFAP2A	P05549	437 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	CRYGB	P07316	175 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	OR8U9	P0C7N5	309 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	PSMB9	P28065	219 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	MC5R	P33032	325 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	ECI1	P42126	302 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	ZNF616	Q08AN1	781 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	MRGPRG-AS1	Q2M3A8	158 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	ZNF260	Q3ZCT1	412 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	C9orf66	Q5T8R8	295 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	TMEM65	Q6PI78	240 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	PPP1R27	Q86WC6	154 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	PDPN	Q86YL7	162 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	LFNG	Q8NES3	379 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	OR1N2	Q8NGR9	330 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	DCUN1D4	Q92564	292 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	DLX4	Q92988	240 aa	Predicted RBP	5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	MS4A10	Q96PG2	267 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	RNF167	Q9H6Y7	350 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	SLC35D1	Q9NTN3	355 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	ZNF221	Q9UK13	617 aa		5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	FOXA2	Q9Y261	457 aa	Predicted RBP	5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	LSM4	Q9Y4Z0	139 aa	Known RBP	5.71	□□□□□ -1.5
ZEB1-223	ENST00000561304	SRRM4	A7MD48	611 aa	Known RBP	5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	LINC00473	A8K010	186 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	RBMXL2	O75526	392 aa	Known RBP	5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	SPDEF	O95238	335 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	APOA2	P02652	100 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	LGALS1	P09382	135 aa	Known RBP	5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	CLEC2L	P0C7M8	214 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	OR8U8	P0C7N1	319 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	GAL	P22466	123 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	FGF9	P31371	208 aa	Predicted RBP	5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	PSMD7	P51665	324 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	RPS16	P62249	146 aa	Known RBP	5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	CD69	Q07108	199 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	ACTBL2	Q562R1	376 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	VAX1	Q5SQQ9	334 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	UNQ5815/PRO19632	Q6UWF5	114 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	H1FOO	Q8IZA3	346 aa	Predicted RBP	5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	BVES	Q8NE79	360 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	OR10J5	Q8NHC4	309 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	GRPEL2	Q8TAA5	225 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	LGALS14	Q8TCE9	139 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	NUDCD2	Q8WVJ2	157 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	DDB2	Q92466	427 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	ARPC1A	Q92747	370 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	ATG5	Q9H1Y0	275 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	OR51E2	Q9H255	320 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	GHITM	Q9H3K2	345 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	STUB1	Q9UNE7	303 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	TENM3	Q9P273	2699 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	SACS	Q9NZJ4	4579 aa		5.7	□□□□□ -1.5
ZEB1-223	ENST00000561304	IGKV1D-13	A0A0B4J2D9	117 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	TMEM235	A6NFC5	223 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	OVOL1	O14753	267 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	SSX5	O60225	188 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	MRPS14	O60783	128 aa	Known RBP	5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	IGLV2-14	P01704	120 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	APELA	P0DMC3	54 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	IGKV1-13	P0DP09	117 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	GADD45A	P24522	165 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	TGFBR1	P36897	503 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	SERPINB10	P48595	397 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	TPPP2	P59282	170 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	MRPS15	P82914	257 aa	Known RBP	5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	ARFRP1	Q13795	201 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	FXYD3	Q14802	87 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	AKIRIN2	Q53H80	203 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	SFXN4	Q6P4A7	337 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	ZNF562	Q6V9R5	426 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304		Q6ZS49	121 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	HAPLN4	Q86UW8	402 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	TCTEX1D1	Q8N7M0	179 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	OR5H6	Q8NGV6	325 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	FLYWCH2	Q96CP2	140 aa	Known RBP	5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	SLC25A38	Q96DW6	304 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	HARBI1	Q96MB7	349 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	TSNAX	Q99598	290 aa	Known RBP	5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	RNF5	Q99942	180 aa		5.69	□□□□□ -1.5
ZEB1-223	ENST00000561304	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms