RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 DTYMKP23919 212 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 OR10A3P58181 314 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 PLA2G7Q13093 441 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 TATDN3Q17R31 274 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 BVESQ8NE79 360 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 OR5T1Q8NG75 326 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 USMG5Q96IX5 58 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 PHB2Q99623 299 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 RSRP1Q9BUV0 290 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 TINAGL1Q9GZM7 467 aaPredicted RBP9.43□□□□□ -0.9
SPG11-219ENST00000559822 ATG5Q9H1Y0 275 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 ZMAT4Q9H898 229 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 RAB26Q9ULW5 256 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 STAB2Q8WWQ8 2551 aa9.43□□□□□ -0.9
SPG11-219ENST00000559822 SLC22A5O76082 557 aa9.42□□□□□ -0.9
SPG11-219ENST00000559822 CTXN2P0C2S0 81 aa9.42□□□□□ -0.9
SPG11-219ENST00000559822 FRMD6-AS1P0C7T7 363 aa9.42□□□□□ -0.9
SPG11-219ENST00000559822 GABARAPL2P60520 117 aa9.42□□□□□ -0.9
SPG11-219ENST00000559822 UBE2KP61086 200 aa9.42□□□□□ -0.9
SPG11-219ENST00000559822 SSBP2P81877 361 aaPredicted RBP9.42□□□□□ -0.9
SPG11-219ENST00000559822 SBSPONQ8IVN8 264 aa9.42□□□□□ -0.9
SPG11-219ENST00000559822 SGPP2Q8IWX5 399 aa9.42□□□□□ -0.9
SPG11-219ENST00000559822 TEX45Q8NA69 505 aa9.42□□□□□ -0.9
SPG11-219ENST00000559822 OSR1Q8TAX0 266 aaPredicted RBP9.42□□□□□ -0.9
SPG11-219ENST00000559822 MAFIPQ8WZ33 124 aa9.42□□□□□ -0.9
SPG11-219ENST00000559822 RCHY1Q96PM5 261 aa9.42□□□□□ -0.9
SPG11-219ENST00000559822 COA4Q9NYJ1 87 aa9.42□□□□□ -0.9
SPG11-219ENST00000559822 ZNF230Q9UIE0 474 aaPredicted RBP9.42□□□□□ -0.9
SPG11-219ENST00000559822 SHISA3A0PJX4 238 aa9.41□□□□□ -0.9
SPG11-219ENST00000559822 TRIM64CA6NLI5 447 aa9.41□□□□□ -0.9
SPG11-219ENST00000559822 MPPED1O15442 326 aa9.41□□□□□ -0.9
SPG11-219ENST00000559822 ACTL6BO94805 426 aa9.41□□□□□ -0.9
SPG11-219ENST00000559822 CRYZL1O95825 349 aa9.41□□□□□ -0.9
SPG11-219ENST00000559822 IGLV1-51P01701 117 aa9.41□□□□□ -0.9
SPG11-219ENST00000559822 DUTP33316 252 aaKnown RBP9.41□□□□□ -0.9
SPG11-219ENST00000559822 PJVKQ0ZLH3 352 aa9.41□□□□□ -0.9
SPG11-219ENST00000559822 TNXAQ16473 311 aa9.41□□□□□ -0.9
SPG11-219ENST00000559822 C22orf42Q6IC83 251 aa9.41□□□□□ -0.9
SPG11-219ENST00000559822 OVCH2Q7RTZ1 564 aa9.41□□□□□ -0.9
SPG11-219ENST00000559822 H1FOOQ8IZA3 346 aaPredicted RBP9.41□□□□□ -0.9
SPG11-219ENST00000559822 OR9G4Q8NGQ1 327 aa9.41□□□□□ -0.9
SPG11-219ENST00000559822 DCSTAMPQ9H295 470 aa9.41□□□□□ -0.9
SPG11-219ENST00000559822 PEF1Q9UBV8 284 aaKnown RBP9.41□□□□□ -0.9
SPG11-219ENST00000559822 MRPS7Q9Y2R9 242 aaKnown RBP9.41□□□□□ -0.9
SPG11-219ENST00000559822 ANKRD34BA5PLL1 514 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 SRRM4A7MD48 611 aaKnown RBP9.4□□□□□ -0.9
SPG11-219ENST00000559822 NOTOA8MTQ0 251 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 H0Y980 276 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 OR9G9P0C7N8 305 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 SNRPBP14678 240 aaKnown RBP9.4□□□□□ -0.9
SPG11-219ENST00000559822 CD36P16671 472 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 KLF5Q13887 457 aaPredicted RBP9.4□□□□□ -0.9
SPG11-219ENST00000559822 PRSS8Q16651 343 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 RPEL1Q2QD12 228 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 ZNF343Q6P1L6 599 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 TPRA1Q86W33 373 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 ZNF645Q8N7E2 425 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 MUC7Q8TAX7 377 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 SRSF12Q8WXF0 261 aaKnown RBP9.4□□□□□ -0.9
SPG11-219ENST00000559822 ACOT12Q8WYK0 555 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 DDB2Q92466 427 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 FCGR1BQ92637 280 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 C5orf30Q96GV9 206 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 SPIN2AQ99865 258 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 SPIN2BQ9BPZ2 258 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 PRELID3BQ9Y3B1 194 aa9.4□□□□□ -0.9
SPG11-219ENST00000559822 KMT2CQ8NEZ4 4911 aaKnown RBP9.39□□□□□ -0.91
SPG11-219ENST00000559822 A0A0B4J203 849 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 MSGN1A6NI15 193 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 FAM223BA6NKX1 122 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 PSMB9P28065 219 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 FGF9P31371 208 aaPredicted RBP9.39□□□□□ -0.91
SPG11-219ENST00000559822 CDK10Q15131 360 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 CDNFQ49AH0 187 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 FAM209BQ5JX69 171 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 UBE2UQ5VVX9 321 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 HACD4Q5VWC8 232 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 KCTD9Q7L273 389 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 FAM223AQ8IWN6 122 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 MMD2Q8IY49 270 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 ADAD2Q8NCV1 583 aaKnown RBP9.39□□□□□ -0.91
SPG11-219ENST00000559822 SNAPC3Q92966 411 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 DCUN1D5Q9BTE7 237 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 ST6GALNAC5Q9BVH7 336 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 Q9H521 79 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 SIGLEC8Q9NYZ4 499 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 PEMTQ9UBM1 199 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 OR2W1Q9Y3N9 320 aa9.39□□□□□ -0.91
SPG11-219ENST00000559822 LINC00473A8K010 186 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 A8MZ25 164 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 FCGR3BO75015 233 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 OR2A4O95047 310 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 HLA-DQB1P01920 261 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 IGHV4-30-4P0DP06 118 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 SYNJ2BPP57105 145 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 GNG2P59768 71 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 DYRK1AQ13627 763 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 LCN12Q6JVE5 192 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 CNIH2Q6PI25 160 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 IDO2Q6ZQW0 420 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms