RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 THBS3P49746 956 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 AKR1C2P52895 323 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 PRRX1P54821 245 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 FBLN7Q53RD9 439 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 ZBTB8BQ8NAP8 495 aaPredicted RBP14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 IL22RA2Q969J5 263 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 C2orf50Q96LR7 162 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 RANBP3Q9H6Z4 567 aaPredicted RBP14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 B3GALNT1O75752 331 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 IFNA21P01568 189 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 P0C879 139 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 C11orf87Q6NUJ2 197 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 SSX9Q7RTT3 188 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 TGIF2LXQ8IUE1 241 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 HIF1ANQ9NWT6 349 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 TMED3Q9Y3Q3 217 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 HILPDAQ9Y5L2 63 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 TEX15Q9BXT5 2789 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 H0YIZ8 118 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 SCGB1D2O95969 90 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 AVPP01185 164 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 VDAC1P21796 283 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 LOXL1Q08397 574 aaPredicted RBP14□□□□□ -0.17
CHRNA3-206ENST00000559658 RAB32Q13637 225 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 RUSC1-AS1Q66K80 236 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 NOXA1Q86UR1 476 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 FOXRED2Q8IWF2 684 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 C1orf159Q96HA4 380 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 RITA1Q96K30 269 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 NMES1Q9C002 83 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 HEXA-AS1Q9H8Q6 139 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 SLC35D1Q9NTN3 355 aa14□□□□□ -0.17
CHRNA3-206ENST00000559658 A0A1W2PPI3 338 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 MARCH11A6NNE9 402 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 B4DSR2 109 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 GZMKP49863 264 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 OR5AN1Q8NGI8 311 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 PPP1R14BQ96C90 147 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 R3HDM4Q96D70 268 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 AJUBAQ96IF1 538 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 CACNG5Q9UF02 275 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 PRELID3BQ9Y3B1 194 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 BOLA1Q9Y3E2 137 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 IGHV1-3A0A0C4DH29 117 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 SRRM4A7MD48 611 aaKnown RBP13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 IGHV4-31P0DP07 118 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 TAGLNQ01995 201 aaKnown RBP13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 TPTE2P1Q5T6R2 138 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 FAM71F2Q6NXP2 309 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 PRSS57Q6UWY2 283 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 OR4D5Q8NGN0 318 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 RNASE11Q8TAA1 199 aaKnown RBP13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 RPEQ96AT9 228 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 NSG2Q9Y328 171 aa13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 SOX21Q9Y651 276 aaPredicted RBP13.99□□□□□ -0.17
CHRNA3-206ENST00000559658 TET2Q6N021 2002 aaPredicted RBP13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 TRAV40A0A0B4J280 105 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 CENPVL3A0A0U1RRI6 287 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 DUXBA0A1W2PPF3 345 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 RBFOX2O43251 390 aaKnown RBP eCLIP13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 OR9G9P0C7N8 305 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 IL3RAP26951 378 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 HTR1DP28221 377 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 S100A10P60903 97 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 TMEM249Q2WGJ8 235 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 CXorf66Q5JRM2 361 aaPredicted RBP13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 OR4S2Q8NH73 311 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 ADTRPQ96IZ2 230 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 PLEKHA2Q9HB19 425 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 PLSCR3Q9NRY6 295 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 OR5AC2Q9NZP5 309 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 MBD2Q9UBB5 411 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 NOTCH2Q04721 2471 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 MYO9AB2RTY4 2548 aa13.98□□□□□ -0.17
CHRNA3-206ENST00000559658 FXYD6-FXYD2A0A087WZ82 144 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 TRAV3A0A0B4J244 114 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 H7C2Y5 167 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 MPC2O95563 127 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 HPRT1P00492 218 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 MBPP02686 304 aaPredicted RBP13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 IGHV4-38-2P0DP08 117 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 LAMTOR1Q6IAA8 161 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 TCTEX1D1Q8N7M0 179 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 LINC01356Q8N9X3 169 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 AMMECR1Q9Y4X0 333 aaPredicted RBP13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 ABCA1O95477 2261 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 CD24P25063 80 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 SAA4P35542 130 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 OR2B8PP59922 312 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 SSX2Q16385 188 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 MIDNQ504T8 468 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 BRD3OSQ6XYD6 125 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 MOB3BQ86TA1 216 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 LSM10Q969L4 123 aaKnown RBP13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 RNF126Q9BV68 326 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 MAGT1Q9H0U3 335 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 C7orf69Q9H7B7 122 aa13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 FAM212BQ9NTI7 297 aaPredicted RBP13.97□□□□□ -0.17
CHRNA3-206ENST00000559658 DPM3Q9P2X0 92 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms