RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ZP3P21754 424 aa11.92□□□□□ -0.5
TPM1-211ENST00000558314 SYNJ2BPP57105 145 aa11.92□□□□□ -0.5
TPM1-211ENST00000558314 TAGLNQ01995 201 aaKnown RBP11.92□□□□□ -0.5
TPM1-211ENST00000558314 SSX1Q16384 188 aa11.92□□□□□ -0.5
TPM1-211ENST00000558314 C22orf42Q6IC83 251 aa11.92□□□□□ -0.5
TPM1-211ENST00000558314 SGPP2Q8IWX5 399 aa11.92□□□□□ -0.5
TPM1-211ENST00000558314 MUC7Q8TAX7 377 aa11.92□□□□□ -0.5
TPM1-211ENST00000558314 C5orf30Q96GV9 206 aa11.92□□□□□ -0.5
TPM1-211ENST00000558314 DCUN1D5Q9BTE7 237 aa11.92□□□□□ -0.5
TPM1-211ENST00000558314 CABLES2Q9BTV7 478 aa11.92□□□□□ -0.5
TPM1-211ENST00000558314 VCX3BQ9H321 246 aa11.92□□□□□ -0.5
TPM1-211ENST00000558314 SHISA3A0PJX4 238 aa11.91□□□□□ -0.5
TPM1-211ENST00000558314 METTL21EPA6NDL7 271 aa11.91□□□□□ -0.5
TPM1-211ENST00000558314 MSGN1A6NI15 193 aa11.91□□□□□ -0.5
TPM1-211ENST00000558314 SRRM4A7MD48 611 aaKnown RBP11.91□□□□□ -0.5
TPM1-211ENST00000558314 IGHV4-30-4P0DP06 118 aa11.91□□□□□ -0.5
TPM1-211ENST00000558314 SSBP2P81877 361 aaPredicted RBP11.91□□□□□ -0.5
TPM1-211ENST00000558314 VMA21Q3ZAQ7 101 aa11.91□□□□□ -0.5
TPM1-211ENST00000558314 OR2B11Q5JQS5 317 aa11.91□□□□□ -0.5
TPM1-211ENST00000558314 ST6GALNAC5Q9BVH7 336 aa11.91□□□□□ -0.5
TPM1-211ENST00000558314 ADAM30Q9UKF2 790 aa11.91□□□□□ -0.5
TPM1-211ENST00000558314 ELF5Q9UKW6 265 aaPredicted RBP11.91□□□□□ -0.5
TPM1-211ENST00000558314 IFITM5A6NNB3 132 aa11.9□□□□□ -0.5
TPM1-211ENST00000558314 H3BUA1 57 aa11.9□□□□□ -0.5
TPM1-211ENST00000558314 MFNGO00587 321 aa11.9□□□□□ -0.5
TPM1-211ENST00000558314 TRBV12-3P01733 135 aa11.9□□□□□ -0.5
TPM1-211ENST00000558314 PRH1P02810 166 aa11.9□□□□□ -0.5
TPM1-211ENST00000558314 TBCEQ15813 527 aaPredicted RBP11.9□□□□□ -0.5
TPM1-211ENST00000558314 RPEL1Q2QD12 228 aa11.9□□□□□ -0.5
TPM1-211ENST00000558314 TMEM177Q53S58 311 aa11.9□□□□□ -0.5
TPM1-211ENST00000558314 TINAGL1Q9GZM7 467 aaPredicted RBP11.9□□□□□ -0.5
TPM1-211ENST00000558314 PEF1Q9UBV8 284 aaKnown RBP11.9□□□□□ -0.5
TPM1-211ENST00000558314 BLOC1S6Q9UL45 172 aa11.9□□□□□ -0.5
TPM1-211ENST00000558314 STAB2Q8WWQ8 2551 aa11.89□□□□□ -0.51
TPM1-211ENST00000558314 IGKV1D-8A0A087WSZ0 117 aa11.89□□□□□ -0.51
TPM1-211ENST00000558314 TRAV1-2A0A0B4J238 106 aa11.89□□□□□ -0.51
TPM1-211ENST00000558314 RAB27BO00194 218 aa11.89□□□□□ -0.51
TPM1-211ENST00000558314 TUSC2O75896 110 aa11.89□□□□□ -0.51
TPM1-211ENST00000558314 IGLV1-51P01701 117 aa11.89□□□□□ -0.51
TPM1-211ENST00000558314 CRYGBP07316 175 aa11.89□□□□□ -0.51
TPM1-211ENST00000558314 RRASP10301 218 aa11.89□□□□□ -0.51
TPM1-211ENST00000558314 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
TPM1-211ENST00000558314 OR9G4Q8NGQ1 327 aa11.89□□□□□ -0.51
TPM1-211ENST00000558314 LINC00473A8K010 186 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 FCGR3BO75015 233 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 ACTL6BO94805 426 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 LYL1P12980 280 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 RAB6AP20340 208 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 AADACP22760 399 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 NFYAP23511 347 aaPredicted RBP11.88□□□□□ -0.51
TPM1-211ENST00000558314 DUTP33316 252 aaKnown RBP11.88□□□□□ -0.51
TPM1-211ENST00000558314 HSPA13P48723 471 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 KLF5Q13887 457 aaPredicted RBP11.88□□□□□ -0.51
TPM1-211ENST00000558314 PRSS8Q16651 343 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 TATDN3Q17R31 274 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 CDNFQ49AH0 187 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 CASC10Q5T4H9 136 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 H1FOOQ8IZA3 346 aaPredicted RBP11.88□□□□□ -0.51
TPM1-211ENST00000558314 ADTRPQ96IZ2 230 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 TMEM68Q96MH6 324 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 TUBA4BQ9H853 241 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 NDUFB11Q9NX14 153 aa11.88□□□□□ -0.51
TPM1-211ENST00000558314 GAR1Q9NY12 217 aaKnown RBP11.88□□□□□ -0.51
TPM1-211ENST00000558314 TRDV1A0A1B0GX56 115 aa11.87□□□□□ -0.51
TPM1-211ENST00000558314 OR9G9P0C7N8 305 aa11.87□□□□□ -0.51
TPM1-211ENST00000558314 PSMB9P28065 219 aa11.87□□□□□ -0.51
TPM1-211ENST00000558314 UBE2KP61086 200 aa11.87□□□□□ -0.51
TPM1-211ENST00000558314 DYRK1AQ13627 763 aa11.87□□□□□ -0.51
TPM1-211ENST00000558314 TEX45Q8NA69 505 aa11.87□□□□□ -0.51
TPM1-211ENST00000558314 NUDCD2Q8WVJ2 157 aa11.87□□□□□ -0.51
TPM1-211ENST00000558314 SRSF12Q8WXF0 261 aaKnown RBP11.87□□□□□ -0.51
TPM1-211ENST00000558314 H0Y980 276 aa11.86□□□□□ -0.51
TPM1-211ENST00000558314 RBMXL2O75526 392 aaKnown RBP11.86□□□□□ -0.51
TPM1-211ENST00000558314 SAA1P0DJI8 122 aaPredicted RBP11.86□□□□□ -0.51
TPM1-211ENST00000558314 RHOGP84095 191 aa11.86□□□□□ -0.51
TPM1-211ENST00000558314 ATP5G2Q06055 141 aa11.86□□□□□ -0.51
TPM1-211ENST00000558314 EXOSC2Q13868 293 aaKnown RBP11.86□□□□□ -0.51
TPM1-211ENST00000558314 C10orf55Q5SWW7 151 aa11.86□□□□□ -0.51
TPM1-211ENST00000558314 ZNF343Q6P1L6 599 aa11.86□□□□□ -0.51
TPM1-211ENST00000558314 KCTD9Q7L273 389 aa11.86□□□□□ -0.51
TPM1-211ENST00000558314 GTSCR1Q86UQ5 136 aa11.86□□□□□ -0.51
TPM1-211ENST00000558314 NR2C2APQ86WQ0 139 aa11.86□□□□□ -0.51
TPM1-211ENST00000558314 Q8N1Y9 231 aa11.86□□□□□ -0.51
TPM1-211ENST00000558314 ADAD2Q8NCV1 583 aaKnown RBP11.86□□□□□ -0.51
TPM1-211ENST00000558314 USMG5Q96IX5 58 aa11.86□□□□□ -0.51
TPM1-211ENST00000558314 ZNF430Q9H8G1 570 aaPredicted RBP11.86□□□□□ -0.51
TPM1-211ENST00000558314 DAPK2Q9UIK4 370 aa11.86□□□□□ -0.51
TPM1-211ENST00000558314 TMEM235A6NFC5 223 aa11.85□□□□□ -0.51
TPM1-211ENST00000558314 GNG2P59768 71 aa11.85□□□□□ -0.51
TPM1-211ENST00000558314 MRGPRG-AS1Q2M3A8 158 aa11.85□□□□□ -0.51
TPM1-211ENST00000558314 VKORC1L1Q8N0U8 176 aa11.85□□□□□ -0.51
TPM1-211ENST00000558314 ZNF645Q8N7E2 425 aa11.85□□□□□ -0.51
TPM1-211ENST00000558314 OSR1Q8TAX0 266 aaPredicted RBP11.85□□□□□ -0.51
TPM1-211ENST00000558314 TCTEX1D2Q8WW35 142 aa11.85□□□□□ -0.51
TPM1-211ENST00000558314 DDB2Q92466 427 aa11.85□□□□□ -0.51
TPM1-211ENST00000558314 SNAPC3Q92966 411 aa11.85□□□□□ -0.51
TPM1-211ENST00000558314 AKIP1Q9NQ31 210 aa11.85□□□□□ -0.51
TPM1-211ENST00000558314 SPATA2Q9UM82 520 aa11.85□□□□□ -0.51
TPM1-211ENST00000558314 PRELID3BQ9Y3B1 194 aa11.85□□□□□ -0.51
TPM1-211ENST00000558314 HUWE1Q7Z6Z7 4374 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms