RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 SMIM3Q9BZL3 60 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 OR2J1Q9GZK6 312 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 ZNF442Q9H7R0 627 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 ZMAT3Q9HA38 289 aaKnown RBP6.78□□□□□ -1.32
RTF1-205ENST00000558298 BEX4Q9NWD9 120 aaPredicted RBP6.78□□□□□ -1.32
RTF1-205ENST00000558298 OR6C3Q9NZP0 311 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 HSPB7Q9UBY9 170 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 UQCR10Q9UDW1 63 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 ANXA10Q9UJ72 324 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 TIMM9Q9Y5J7 89 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 RTTNQ86VV8 2226 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 IGHV1-18A0A0C4DH31 117 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 J3QW42 95 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 SLC16A7O60669 478 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 REG1AP05451 166 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 MMP7P09237 267 aaPredicted RBP6.77□□□□□ -1.33
RTF1-205ENST00000558298 FUT3P21217 361 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 GLRA1P23415 457 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 RPL29P47914 159 aaKnown RBP6.77□□□□□ -1.33
RTF1-205ENST00000558298 PSMB3P49720 205 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 PIGPP57054 158 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 GRB2P62993 217 aaKnown RBP6.77□□□□□ -1.33
RTF1-205ENST00000558298 FOXL1Q12952 345 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 OR5I1Q13606 314 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 ODF4Q2M2E3 257 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A2PQ658T7 463 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 SLC25A24Q6NUK1 477 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 CDPF1Q6NVV7 123 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 ZNF343Q6P1L6 599 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 WFDC8Q8IUA0 241 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 ZNF738Q8NE65 137 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 OR51T1Q8NGJ9 327 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 OR4D5Q8NGN0 318 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 RTN4IP1Q8WWV3 396 aaPredicted RBP6.77□□□□□ -1.33
RTF1-205ENST00000558298 PIGTQ969N2 578 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 SMIM12Q96EX1 92 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 GPER1Q99527 375 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 RARRES2Q99969 163 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 SMIM7Q9BQ49 75 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 MAGT1Q9H0U3 335 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 TMEM106BQ9NUM4 274 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 ZNF701Q9NV72 531 aaPredicted RBP6.77□□□□□ -1.33
RTF1-205ENST00000558298 PLA2G2EQ9NZK7 142 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 WIPI2Q9Y4P8 454 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 MED13LQ71F56 2210 aa6.77□□□□□ -1.33
RTF1-205ENST00000558298 FLNAP21333 2647 aaKnown RBP6.76□□□□□ -1.33
RTF1-205ENST00000558298 IGKV1D-43A0A0B4J1Z2 117 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 ZNF503-AS2A6NEH8 195 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 NKX6-3A6NJ46 265 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 ZNF705FA8MVS1 300 aaPredicted RBP6.76□□□□□ -1.33
RTF1-205ENST00000558298 K7ERU9 68 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 OVOL3O00110 214 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 TOMM40O96008 361 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 PNPP00491 289 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 CRYAAP02489 173 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 CTXN2P0C2S0 81 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 CECR9P0C854 216 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 ZNF705DP0CH99 300 aaPredicted RBP6.76□□□□□ -1.33
RTF1-205ENST00000558298 ZNF705BP0CI00 300 aaPredicted RBP6.76□□□□□ -1.33
RTF1-205ENST00000558298 B4GALT1P15291 398 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 MDH2P40926 338 aaKnown RBP6.76□□□□□ -1.33
RTF1-205ENST00000558298 PTTG1IPP53801 180 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 PCBD1P61457 104 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 HERV-K104P61576 105 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 ZNF92Q03936 586 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 UBE2V1Q13404 147 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 EFNB3Q15768 340 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 C21orf62-AS1Q17RA5 79 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 DMRTA1Q5VZB9 504 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 PRSS57Q6UWY2 283 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 TCTEX1D1Q8N7M0 179 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 SPSB1Q96BD6 273 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 TMEM56Q96MV1 263 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 TP53RKQ96S44 253 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 RNF2Q99496 336 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 PBOV1Q9GZY1 135 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 ZNF286AQ9HBT8 521 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 CBLN4Q9NTU7 201 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 AURKAIP1Q9NWT8 199 aaPredicted RBP6.76□□□□□ -1.33
RTF1-205ENST00000558298 FAM206AQ9NX38 181 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 SLC45A2Q9UMX9 530 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 LAMP3Q9UQV4 416 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 TMEM56-RWDD3S4R434 201 aa6.76□□□□□ -1.33
RTF1-205ENST00000558298 CHD3Q12873 2000 aaKnown RBP6.76□□□□□ -1.33
RTF1-205ENST00000558298 MAP1AP78559 2803 aaPredicted RBP6.75□□□□□ -1.33
RTF1-205ENST00000558298 MTORP42345 2549 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 USF3Q68DE3 2245 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 IGHV2OR16-5A0A0B4J2B6 119 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 FOXI3A8MTJ6 420 aaPredicted RBP6.75□□□□□ -1.33
RTF1-205ENST00000558298 PDE6DO43924 150 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 TOX4O94842 621 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 MT-ND6P03923 174 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 WNT2P09544 360 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 NPSP0C0P6 89 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 CTLA4P16410 223 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 VDAC1P21796 283 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 TUBG1P23258 451 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 NPBWR2P48146 333 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 RAB7AP51149 207 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 PPP1CBP62140 327 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms