RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 PIPOXQ9P0Z9 390 aa6.79□□□□□ -1.32
GTF2A1-204ENST00000556268 RNF150Q9ULK6 438 aa6.79□□□□□ -1.32
GTF2A1-204ENST00000556268 GAB2Q9UQC2 676 aa6.79□□□□□ -1.32
GTF2A1-204ENST00000556268 H0YJW9 148 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 RAB29O14966 203 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 PDCD6O75340 191 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 RBBP9O75884 186 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 IGHV3-11P01762 117 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 IFNA6P05013 189 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 CD37P11049 281 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 MGMTP16455 207 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 PSG5Q15238 335 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 HMGN3Q15651 99 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 ECSCRQ19T08 205 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 YIF1BQ5BJH7 314 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 OR2G6Q5TZ20 316 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 TMPRSS11AQ6ZMR5 421 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 ANKRD13BQ86YJ7 626 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 SGPP2Q8IWX5 399 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 LFNGQ8NES3 379 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 OR2AK2Q8NG84 335 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 OR13C5Q8NGS8 318 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 PGLYRP3Q96LB9 341 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 BANF2Q9H503 90 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 GHRLQ9UBU3 117 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 CLEC2DQ9UHP7 191 aa6.78□□□□□ -1.32
GTF2A1-204ENST00000556268 OR5H14A6NHG9 310 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 H0Y980 276 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 H3BUA1 57 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 BAG2O95816 211 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 NAPSAO96009 420 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 TFAP2AP05549 437 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 CSN3P07498 182 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 ZP3P21754 424 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 MOGAT2Q3SYC2 334 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 AWAT2Q6E213 333 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 UNQ5815/PRO19632Q6UWF5 114 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 FAM131AQ6UXB0 335 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 HAPLN4Q86UW8 402 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 CCDC28AQ8IWP9 274 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 OR9G4Q8NGQ1 327 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 ABHD5Q8WTS1 349 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 PTX4Q96A99 478 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 UQCC2Q9BRT2 126 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 HIPK2Q9H2X6 1198 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 CKLFQ9UBR5 152 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 WASHC3Q9Y3C0 194 aa6.77□□□□□ -1.33
GTF2A1-204ENST00000556268 ALMS1Q8TCU4 4167 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 A0A1W2PPK0 400 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 CRTAPO75718 401 aaPredicted RBP6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 TRGV3P03979 118 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 CRYGBP07316 175 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 ARSBP15848 533 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 CD40LGP29965 261 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 CAPGP40121 348 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 TPPP2P59282 170 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 RPL39P5Q59GN2 51 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 LCE1AQ5T7P2 110 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 ZNF343Q6P1L6 599 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 ZFP1Q6P2D0 407 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 GLDNQ6ZMI3 551 aaPredicted RBP6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 JAGN1Q8N5M9 183 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 SULT4A1Q9BR01 284 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 FAM103A1Q9BTL3 118 aaKnown RBP6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 FAAP24Q9BTP7 215 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 TM2D2Q9BX73 214 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 DIMT1Q9UNQ2 313 aaKnown RBP6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 EXOSC1Q9Y3B2 195 aaKnown RBP6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 A3GALT2U3KPV4 340 aa6.76□□□□□ -1.33
GTF2A1-204ENST00000556268 TRBV6-6A0A0A6YYG2 114 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 A0A0G2JLM5 398 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 SLC22A1O15245 554 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 IGKV1-16P04430 117 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 FXYD3Q14802 87 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 FAM90A2PQ658T7 463 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 ZNF383Q8NA42 475 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 POC5Q8NA72 575 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 OR5T1Q8NG75 326 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 FAM46BQ96A09 425 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 ABHD14BQ96IU4 210 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 TMEM68Q96MH6 324 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 DERL3Q96Q80 235 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 TSNAXQ99598 290 aaKnown RBP6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 C9orf16Q9BUW7 83 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 TM2D1Q9BX74 207 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 PARP12Q9H0J9 701 aaKnown RBP6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 RIMS4Q9H426 269 aaPredicted RBP6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 TUBA4BQ9H853 241 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 ABRACLQ9P1F3 81 aa6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 METTL1Q9UBP6 276 aaKnown RBP6.75□□□□□ -1.33
GTF2A1-204ENST00000556268 C13orf42A0A1B0GVH6 325 aa6.74□□□□□ -1.33
GTF2A1-204ENST00000556268 IRGMA1A4Y4 181 aa6.74□□□□□ -1.33
GTF2A1-204ENST00000556268 IZUMO1RA6ND01 250 aa6.74□□□□□ -1.33
GTF2A1-204ENST00000556268 CIB2O75838 187 aa6.74□□□□□ -1.33
GTF2A1-204ENST00000556268 CA2P00918 260 aa6.74□□□□□ -1.33
GTF2A1-204ENST00000556268 IGLV2-23P01705 113 aa6.74□□□□□ -1.33
GTF2A1-204ENST00000556268 HTR2CP28335 458 aa6.74□□□□□ -1.33
GTF2A1-204ENST00000556268 CEACAM6P40199 344 aa6.74□□□□□ -1.33
GTF2A1-204ENST00000556268 SYNJ2BPP57105 145 aa6.74□□□□□ -1.33
GTF2A1-204ENST00000556268 LINC00205P59089 165 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms