RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 PEF1Q9UBV8 284 aaKnown RBP5.97□□□□□ -1.45
PTCSC3-201ENST00000556013 A3GALT2U3KPV4 340 aa5.97□□□□□ -1.45
PTCSC3-201ENST00000556013 SRRM4A7MD48 611 aaKnown RBP5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 SCGNO76038 276 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 IGHV3-11P01762 117 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 HIST1H1DP16402 221 aaKnown RBP5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 RAB3BP20337 219 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 DUTP33316 252 aaKnown RBP5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 TALDO1P37837 337 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 MECP2P51608 486 aaKnown RBP5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 AQP4P55087 323 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 CLDN12P56749 244 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 LINC00205P59089 165 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 SSBP2P81877 361 aaPredicted RBP5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 VMA21Q3ZAQ7 101 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 CASC10Q5T4H9 136 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 ZNF367Q7RTV3 350 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 SGPP2Q8IWX5 399 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 H1FOOQ8IZA3 346 aaPredicted RBP5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 OR5T1Q8NG75 326 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 OR9G4Q8NGQ1 327 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 NRG4Q8WWG1 115 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 DDB2Q92466 427 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 HARBI1Q96MB7 349 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 CCDC90BQ9GZT6 254 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 OR2D2Q9H210 308 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 ZNF355PQ9NSJ1 428 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 NKX1-2Q9UD57 310 aaPredicted RBP5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 RBM7Q9Y580 266 aaKnown RBP5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 STAB2Q8WWQ8 2551 aa5.96□□□□□ -1.46
PTCSC3-201ENST00000556013 TNCP24821 2201 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 SACSQ9NZJ4 4579 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 TRBV9A0A0B4J1U6 114 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 MSGN1A6NI15 193 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 FAM223BA6NKX1 122 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 TRIM64CA6NLI5 447 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 BET1O15155 118 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 TMEM127O75204 238 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 ACTL6BO94805 426 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 HLA-DQB1P01920 261 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 OR9G9P0C7N8 305 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 IGHV4-30-4P0DP06 118 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 MYL9P24844 172 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 FGF9P31371 208 aaPredicted RBP5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 SCAND1P57086 179 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 ARFRP1Q13795 201 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 PRSS8Q16651 343 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 KLK9Q2XQG4 91 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 IGSF11Q5DX21 431 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 IL34Q6ZMJ4 242 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 SLC25A42Q86VD7 318 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 TPRA1Q86W33 373 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 FAM223AQ8IWN6 122 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 LAX1Q8IWV1 398 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 Q8N402 240 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 TTC9CQ8N5M4 171 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 BVESQ8NE79 360 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 GRPEL2Q8TAA5 225 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 CASTOR1Q8WTX7 329 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 KCTD12Q96CX2 325 aaKnown RBP5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 SPIN2AQ99865 258 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 SPIN2BQ9BPZ2 258 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 GINS4Q9BRT9 223 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 YTHDF1Q9BYJ9 559 aaKnown RBP5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 NDUFB11Q9NX14 153 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 PEMTQ9UBM1 199 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 KLK9Q9UKQ9 250 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 RAB26Q9ULW5 256 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 PRELID3BQ9Y3B1 194 aa5.95□□□□□ -1.46
PTCSC3-201ENST00000556013 A0A0B4J203 849 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 NOTOA8MTQ0 251 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 OR2A4O95047 310 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 LYL1P12980 280 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 GNB3P16520 340 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 MAS1LP35410 378 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 PJVKQ0ZLH3 352 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 DYRK1AQ13627 763 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 CDK10Q15131 360 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 MSMO1Q15800 293 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 MRGPRG-AS1Q2M3A8 158 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 CDNFQ49AH0 187 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 HES5Q5TA89 166 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 HACD4Q5VWC8 232 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 LCN12Q6JVE5 192 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 CNIH2Q6PI25 160 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 OVCH2Q7RTZ1 564 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 MMD2Q8IY49 270 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 ZNF645Q8N7E2 425 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 ADAD2Q8NCV1 583 aaKnown RBP5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 VSTM2AQ8TAG5 236 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 SRSF12Q8WXF0 261 aaKnown RBP5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 HSD17B10Q99714 261 aaKnown RBP5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 SPATA25Q9BR10 227 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 AIFM2Q9BRQ8 373 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 THAP7Q9BT49 309 aaPredicted RBP5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 EDA2RQ9HAV5 297 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 OR2W1Q9Y3N9 320 aa5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 DYNC2H1Q8NCM8 4307 aaKnown RBP5.94□□□□□ -1.46
PTCSC3-201ENST00000556013 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.93□□□□□ -1.46
PTCSC3-201ENST00000556013 SHISA3A0PJX4 238 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms