RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 NCOR1P1Q9H4R4 102 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 NCBP2LA6PVI3 153 aaKnown RBP8.28□□□□□ -1.08
NEK9-205ENST00000555405 POM121CA8CG34 1229 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 AVPP01185 164 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 IFNA17P01571 189 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 GNB1P62873 340 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 LY6EQ16553 131 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 LDLRAD2Q5SZI1 272 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 ODF3L1Q8IXM7 274 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 ZNF439Q8NDP4 499 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 GPR146Q96CH1 333 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 HARBI1Q96MB7 349 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 H0Y980 276 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 TIMM23O14925 209 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 GAPDHP04406 335 aaKnown RBP8.27□□□□□ -1.09
NEK9-205ENST00000555405 IAPPP10997 89 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 MYOD1P15172 320 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 SAA4P35542 130 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 DHODHQ02127 395 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 RAB32Q13637 225 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 RTL8BQ17RB0 113 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 CXorf66Q5JRM2 361 aaPredicted RBP8.27□□□□□ -1.09
NEK9-205ENST00000555405 LINC01356Q8N9X3 169 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 OR4P4Q8NGL7 312 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 ABHD5Q8WTS1 349 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 RHOVQ96L33 236 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 DUX5Q96PT3 197 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 ARPC5O15511 151 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 IGKV1-39P01597 117 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 IGKV1D-39P04432 117 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 SMR3AQ99954 134 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 KPTNQ9Y664 436 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 FN1P02751 2386 aaKnown RBP8.27□□□□□ -1.09
NEK9-205ENST00000555405 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 LEUTXA8MZ59 168 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 M0R1W7 72 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 SLC25A17O43808 307 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 HOXB4P17483 251 aaPredicted RBP8.27□□□□□ -1.09
NEK9-205ENST00000555405 CNTFRP26992 372 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 THBS3P49746 956 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 POLR2GP62487 172 aaKnown RBP eCLIP8.27□□□□□ -1.09
NEK9-205ENST00000555405 LY6G6FQ5SQ64 297 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 ZBTB34Q8NCN2 500 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 OR5M8Q8NGP6 311 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 FLYWCH2Q96CP2 140 aaKnown RBP8.27□□□□□ -1.09
NEK9-205ENST00000555405 GALNT14Q96FL9 552 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 RITA1Q96K30 269 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 ZNF251Q9BRH9 671 aa8.27□□□□□ -1.09
NEK9-205ENST00000555405 UCP1P25874 307 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 C11orf87Q6NUJ2 197 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 ZNF66Q6ZN08 573 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 C8orf46Q8TAG6 207 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 SIRPDQ9H106 197 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 YAE1D1Q9NRH1 226 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 CENPVL3A0A0U1RRI6 287 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 MARCH11A6NNE9 402 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 FSTL3O95633 263 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 CDS2O95674 445 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 BRWD1-AS2P59051 145 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 RND3P61587 244 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 Q6ZRM9 215 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 DYNAPQ8N1N2 210 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 OR4A16Q8NH70 328 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 OR4S2Q8NH73 311 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 THAP6Q8TBB0 222 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 C2orf50Q96LR7 162 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 NABP2Q9BQ15 211 aa8.26□□□□□ -1.09
NEK9-205ENST00000555405 MS4A7Q9GZW8 240 aaPredicted RBP8.26□□□□□ -1.09
NEK9-205ENST00000555405 AMMECR1Q9Y4X0 333 aaPredicted RBP8.26□□□□□ -1.09
NEK9-205ENST00000555405 IGHV1-3A0A0C4DH29 117 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 SH2D7A6NKC9 451 aaPredicted RBP8.25□□□□□ -1.09
NEK9-205ENST00000555405 SNAPC5O75971 98 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 ACTL6BO94805 426 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 IGKV1D-33P01593 117 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 IGKV1-33P01594 117 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 IGKV1-5P01602 117 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 CEACAM3P40198 252 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 CAV2P51636 162 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 SMCO1Q147U7 214 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 C9orf152Q5JTZ5 239 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 OR10A7Q8NGE5 316 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 DCUN1D4Q92564 292 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 TNFRSF14Q92956 283 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 RAB18Q9NP72 206 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 HSPB11Q9Y547 144 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 PDZD2O15018 2839 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 A0A0B4J2A0 478 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 MDFIC2A0A1B0GVS7 189 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 CEBPZOSA8MTT3 80 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 SSSCA1O60232 199 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 VDAC1P21796 283 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 MECP2P51608 486 aaKnown RBP8.25□□□□□ -1.09
NEK9-205ENST00000555405 MMDQ15546 238 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 SPNS3Q6ZMD2 512 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 TMEM219Q86XT9 240 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 SMIM3Q9BZL3 60 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 MBD2Q9UBB5 411 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 SHPKQ9UHJ6 478 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 NUP50Q9UKX7 468 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 SRRM4A7MD48 611 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms