RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 KLF5Q13887 457 aaPredicted RBP14.38□□□□□ -0.11
CPSF2-203ENST00000554290 USMG5Q96IX5 58 aa14.38□□□□□ -0.11
CPSF2-203ENST00000554290 ADTRPQ96IZ2 230 aa14.38□□□□□ -0.11
CPSF2-203ENST00000554290 PHB2Q99623 299 aa14.38□□□□□ -0.11
CPSF2-203ENST00000554290 TINAGL1Q9GZM7 467 aaPredicted RBP14.38□□□□□ -0.11
CPSF2-203ENST00000554290 BLOC1S6Q9UL45 172 aa14.38□□□□□ -0.11
CPSF2-203ENST00000554290 RAB27BO00194 218 aa14.37□□□□□ -0.11
CPSF2-203ENST00000554290 MFNGO00587 321 aa14.37□□□□□ -0.11
CPSF2-203ENST00000554290 HSPA13P48723 471 aa14.37□□□□□ -0.11
CPSF2-203ENST00000554290 OR10A3P58181 314 aa14.37□□□□□ -0.11
CPSF2-203ENST00000554290 ARL6IP1Q15041 203 aa14.37□□□□□ -0.11
CPSF2-203ENST00000554290 TATDN3Q17R31 274 aa14.37□□□□□ -0.11
CPSF2-203ENST00000554290 VMA21Q3ZAQ7 101 aa14.37□□□□□ -0.11
CPSF2-203ENST00000554290 HAPLN4Q86UW8 402 aa14.37□□□□□ -0.11
CPSF2-203ENST00000554290 SGPP2Q8IWX5 399 aa14.37□□□□□ -0.11
CPSF2-203ENST00000554290 MAFIPQ8WZ33 124 aa14.37□□□□□ -0.11
CPSF2-203ENST00000554290 COA4Q9NYJ1 87 aa14.37□□□□□ -0.11
CPSF2-203ENST00000554290 PEF1Q9UBV8 284 aaKnown RBP14.37□□□□□ -0.11
CPSF2-203ENST00000554290 ZNF230Q9UIE0 474 aaPredicted RBP14.37□□□□□ -0.11
CPSF2-203ENST00000554290 H0Y980 276 aa14.36□□□□□ -0.11
CPSF2-203ENST00000554290 IGHV4-30-4P0DP06 118 aa14.36□□□□□ -0.11
CPSF2-203ENST00000554290 RAB3BP20337 219 aa14.36□□□□□ -0.11
CPSF2-203ENST00000554290 SSX1Q16384 188 aa14.36□□□□□ -0.11
CPSF2-203ENST00000554290 CASC10Q5T4H9 136 aa14.36□□□□□ -0.11
CPSF2-203ENST00000554290 Q8N1Y9 231 aa14.36□□□□□ -0.11
CPSF2-203ENST00000554290 TEX45Q8NA69 505 aa14.36□□□□□ -0.11
CPSF2-203ENST00000554290 OR9G4Q8NGQ1 327 aa14.36□□□□□ -0.11
CPSF2-203ENST00000554290 NDUFB11Q9NX14 153 aa14.36□□□□□ -0.11
CPSF2-203ENST00000554290 TRDV1A0A1B0GX56 115 aa14.35□□□□□ -0.11
CPSF2-203ENST00000554290 MSGN1A6NI15 193 aa14.35□□□□□ -0.11
CPSF2-203ENST00000554290 SRRM4A7MD48 611 aaKnown RBP14.35□□□□□ -0.11
CPSF2-203ENST00000554290 A8MZ25 164 aa14.35□□□□□ -0.11
CPSF2-203ENST00000554290 LYL1P12980 280 aa14.35□□□□□ -0.11
CPSF2-203ENST00000554290 SYNJ2BPP57105 145 aa14.35□□□□□ -0.11
CPSF2-203ENST00000554290 UBE2KP61086 200 aa14.35□□□□□ -0.11
CPSF2-203ENST00000554290 ZNF343Q6P1L6 599 aa14.35□□□□□ -0.11
CPSF2-203ENST00000554290 Q6ZS49 121 aa14.35□□□□□ -0.11
CPSF2-203ENST00000554290 H1FOOQ8IZA3 346 aaPredicted RBP14.35□□□□□ -0.11
CPSF2-203ENST00000554290 C5orf30Q96GV9 206 aa14.35□□□□□ -0.11
CPSF2-203ENST00000554290 ATG5Q9H1Y0 275 aa14.35□□□□□ -0.11
CPSF2-203ENST00000554290 SHISA3A0PJX4 238 aa14.34□□□□□ -0.11
CPSF2-203ENST00000554290 CRYZL1O95825 349 aa14.34□□□□□ -0.11
CPSF2-203ENST00000554290 GALP22466 123 aa14.34□□□□□ -0.11
CPSF2-203ENST00000554290 DUTP33316 252 aaKnown RBP14.34□□□□□ -0.11
CPSF2-203ENST00000554290 TNXAQ16473 311 aa14.34□□□□□ -0.11
CPSF2-203ENST00000554290 PRSS8Q16651 343 aa14.34□□□□□ -0.11
CPSF2-203ENST00000554290 IZUMO2Q6UXV1 221 aa14.34□□□□□ -0.11
CPSF2-203ENST00000554290 OSR1Q8TAX0 266 aaPredicted RBP14.34□□□□□ -0.11
CPSF2-203ENST00000554290 DDB2Q92466 427 aa14.34□□□□□ -0.11
CPSF2-203ENST00000554290 CNBD2Q96M20 576 aa14.34□□□□□ -0.11
CPSF2-203ENST00000554290 PALMDQ9NP74 551 aa14.34□□□□□ -0.11
CPSF2-203ENST00000554290 MPPED1O15442 326 aa14.33□□□□□ -0.12
CPSF2-203ENST00000554290 CREBL2O60519 120 aaPredicted RBP14.33□□□□□ -0.12
CPSF2-203ENST00000554290 ACTL6BO94805 426 aa14.33□□□□□ -0.12
CPSF2-203ENST00000554290 OR9G9P0C7N8 305 aa14.33□□□□□ -0.12
CPSF2-203ENST00000554290 APELAP0DMC3 54 aa14.33□□□□□ -0.12
CPSF2-203ENST00000554290 DTYMKP23919 212 aa14.33□□□□□ -0.12
CPSF2-203ENST00000554290 DYRK1AQ13627 763 aa14.33□□□□□ -0.12
CPSF2-203ENST00000554290 RPEL1Q2QD12 228 aa14.33□□□□□ -0.12
CPSF2-203ENST00000554290 SRSF12Q8WXF0 261 aaKnown RBP14.33□□□□□ -0.12
CPSF2-203ENST00000554290 ACOT12Q8WYK0 555 aa14.33□□□□□ -0.12
CPSF2-203ENST00000554290 SNAPC3Q92966 411 aa14.33□□□□□ -0.12
CPSF2-203ENST00000554290 CITED4Q96RK1 184 aa14.33□□□□□ -0.12
CPSF2-203ENST00000554290 TM2D3Q9BRN9 247 aa14.33□□□□□ -0.12
CPSF2-203ENST00000554290 C19orf73Q9NVV2 129 aa14.33□□□□□ -0.12
CPSF2-203ENST00000554290 A0A0B4J203 849 aa14.32□□□□□ -0.12
CPSF2-203ENST00000554290 LINC00473A8K010 186 aa14.32□□□□□ -0.12
CPSF2-203ENST00000554290 CTXN2P0C2S0 81 aa14.32□□□□□ -0.12
CPSF2-203ENST00000554290 DEFA5Q01523 94 aa14.32□□□□□ -0.12
CPSF2-203ENST00000554290 MRGPRG-AS1Q2M3A8 158 aa14.32□□□□□ -0.12
CPSF2-203ENST00000554290 CDNFQ49AH0 187 aa14.32□□□□□ -0.12
CPSF2-203ENST00000554290 LCN12Q6JVE5 192 aa14.32□□□□□ -0.12
CPSF2-203ENST00000554290 IL34Q6ZMJ4 242 aa14.32□□□□□ -0.12
CPSF2-203ENST00000554290 ADAD2Q8NCV1 583 aaKnown RBP14.32□□□□□ -0.12
CPSF2-203ENST00000554290 SIGLEC8Q9NYZ4 499 aa14.32□□□□□ -0.12
CPSF2-203ENST00000554290 IGKV1D-8A0A087WSZ0 117 aa14.31□□□□□ -0.12
CPSF2-203ENST00000554290 SLC22A5O76082 557 aa14.31□□□□□ -0.12
CPSF2-203ENST00000554290 OR2A4O95047 310 aa14.31□□□□□ -0.12
CPSF2-203ENST00000554290 C22orf42Q6IC83 251 aa14.31□□□□□ -0.12
CPSF2-203ENST00000554290 IDO2Q6ZQW0 420 aa14.31□□□□□ -0.12
CPSF2-203ENST00000554290 GTSCR1Q86UQ5 136 aa14.31□□□□□ -0.12
CPSF2-203ENST00000554290 SPIN2AQ99865 258 aa14.31□□□□□ -0.12
CPSF2-203ENST00000554290 SPIN2BQ9BPZ2 258 aa14.31□□□□□ -0.12
CPSF2-203ENST00000554290 DCUN1D5Q9BTE7 237 aa14.31□□□□□ -0.12
CPSF2-203ENST00000554290 ST6GALNAC5Q9BVH7 336 aa14.31□□□□□ -0.12
CPSF2-203ENST00000554290 PEMTQ9UBM1 199 aa14.31□□□□□ -0.12
CPSF2-203ENST00000554290 PRELID3BQ9Y3B1 194 aa14.31□□□□□ -0.12
CPSF2-203ENST00000554290 FAM223BA6NKX1 122 aa14.3□□□□□ -0.12
CPSF2-203ENST00000554290 TRBV12-3P01733 135 aa14.3□□□□□ -0.12
CPSF2-203ENST00000554290 CSN3P07498 182 aa14.3□□□□□ -0.12
CPSF2-203ENST00000554290 RHOGP84095 191 aa14.3□□□□□ -0.12
CPSF2-203ENST00000554290 CDK10Q15131 360 aa14.3□□□□□ -0.12
CPSF2-203ENST00000554290 FAM223AQ8IWN6 122 aa14.3□□□□□ -0.12
CPSF2-203ENST00000554290 MMD2Q8IY49 270 aa14.3□□□□□ -0.12
CPSF2-203ENST00000554290 Q8N402 240 aa14.3□□□□□ -0.12
CPSF2-203ENST00000554290 ZNF645Q8N7E2 425 aa14.3□□□□□ -0.12
CPSF2-203ENST00000554290 DCSTAMPQ9H295 470 aa14.3□□□□□ -0.12
CPSF2-203ENST00000554290 ELF5Q9UKW6 265 aaPredicted RBP14.3□□□□□ -0.12
CPSF2-203ENST00000554290 MRPS7Q9Y2R9 242 aaKnown RBP14.3□□□□□ -0.12
CPSF2-203ENST00000554290 OR2W1Q9Y3N9 320 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms