RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 OR52N1Q8NH53 320 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 LMX1AQ8TE12 382 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 MAFIPQ8WZ33 124 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 LZICQ8WZA0 190 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 NMNAT3Q96T66 252 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 AIF1LQ9BQI0 150 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 ZNF286AQ9HBT8 521 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 LHX9Q9NQ69 397 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 PRTFDC1Q9NRG1 225 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 PYCARDQ9ULZ3 195 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 SSR3Q9UNL2 185 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 SLC35A3Q9Y2D2 325 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 COQ4Q9Y3A0 265 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 PHLDA3Q9Y5J5 127 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 ATRNO75882 1429 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 BRCA1P38398 1863 aaKnown RBP1.45□□□□□ -2.18
SRP54-204ENST00000553923 MTUS2Q5JR59 1369 aa1.45□□□□□ -2.18
SRP54-204ENST00000553923 NOS1P29475 1434 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 TNS2Q63HR2 1409 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 TRBV20OR9-2A0A075B6H5 130 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.44□□□□□ -2.18
SRP54-204ENST00000553923 A0A0B4J2C4 111 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 IGKV1-12A0A0C4DH73 117 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 TMEM269A0A1B0GVZ9 245 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 TRAPPC13A5PLN9 417 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 OR11H12B2RN74 326 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.44□□□□□ -2.18
SRP54-204ENST00000553923 I3L521 148 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 CST8O60676 142 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 PFDN1O60925 122 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 BANF1O75531 89 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 NDUFC2O95298 119 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 CCNE2O96020 404 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 IGKV1D-12P01611 117 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 IGHV1-46P01743 117 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 IGHMP01871 453 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 CRYGDP07320 174 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 ZNF705DP0CH99 300 aaPredicted RBP1.44□□□□□ -2.18
SRP54-204ENST00000553923 CNTFRP26992 372 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 RAB13P51153 203 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 NCALDP61601 193 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 HSPE1P61604 102 aaKnown RBP1.44□□□□□ -2.18
SRP54-204ENST00000553923 CAV1Q03135 178 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 ENDOGQ14249 297 aaKnown RBP1.44□□□□□ -2.18
SRP54-204ENST00000553923 SMCO1Q147U7 214 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 IAH1Q2TAA2 248 aaPredicted RBP1.44□□□□□ -2.18
SRP54-204ENST00000553923 GLT8D1Q68CQ7 371 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 PRSS54Q6PEW0 395 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 DCUN1D2Q6PH85 259 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 TBPL2Q6SJ96 375 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 GRINAQ7Z429 371 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 MKXQ8IYA7 352 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 SAXO1Q8IYX7 474 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 EIF4E3Q8N5X7 224 aaKnown RBP1.44□□□□□ -2.18
SRP54-204ENST00000553923 ZNF433Q8N7K0 673 aaPredicted RBP1.44□□□□□ -2.18
SRP54-204ENST00000553923 C12orf29Q8N999 325 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 GDPD1Q8N9F7 314 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 OR11H1Q8NG94 326 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 OR11H2Q8NH07 326 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 SLC25A40Q8TBP6 338 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 HIST1H2BAQ96A08 127 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 ROPN1LQ96C74 230 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 CMBLQ96DG6 245 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 RMI2Q96E14 147 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 CCL13Q99616 98 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 DDA1Q9BW61 102 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 MED11Q9P086 117 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 TBX21Q9UL17 535 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 MRPS16Q9Y3D3 137 aaKnown RBP1.44□□□□□ -2.18
SRP54-204ENST00000553923 OR51B4Q9Y5P0 310 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 TRAPPC1Q9Y5R8 145 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 ICOSQ9Y6W8 199 aa1.44□□□□□ -2.18
SRP54-204ENST00000553923 PIK3C2GO75747 1445 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 PBRM1Q86U86 1689 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 IGLV4-69A0A075B6H9 119 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 IGHV3-43A0A0B4J1X8 118 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 A0A0J9YY10 115 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 A0A1B0GX78 115 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 A0A1W2PQ67 120 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 C7orf66A4D0T2 115 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 MAP1LC3B2A6NCE7 125 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 IGLL5B9A064 214 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 H7C1C5 153 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 LST1O00453 97 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 BET1O15155 118 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 SLC25A20O43772 301 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 MFSD11O43934 449 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 PDYNP01213 254 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 IGKV1D-33P01593 117 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 IGKV1-33P01594 117 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 IGLV3-27P01718 113 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 HMGN1P05114 100 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 C8GP07360 202 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 CD7P09564 240 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 LINC00869P0C866 280 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 PTHLHP12272 177 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 IFI30P13284 250 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 CBR1P16152 277 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 NTF3P20783 257 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 ATP6V0CP27449 155 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms