RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 TAS2R46P59540 309 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 LIN54Q6MZP7 749 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 GLDNQ6ZMI3 551 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-209ENST00000553855 NDUFA11Q86Y39 141 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 H1FOOQ8IZA3 346 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-209ENST00000553855 Q8N6K4 173 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 Q8N9W7 124 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 DRAXINQ8NBI3 349 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-209ENST00000553855 ABHD5Q8WTS1 349 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 AGMATQ9BSE5 352 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 DCUN1D5Q9BTE7 237 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 NAA50Q9GZZ1 169 aaKnown RBP6.61□□□□□ -1.35
PSEN1-209ENST00000553855 PARP12Q9H0J9 701 aaKnown RBP6.61□□□□□ -1.35
PSEN1-209ENST00000553855 MMP27Q9H306 513 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 TSSC4Q9Y5U2 329 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-209ENST00000553855 H0YJW9 148 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 SSX5O60225 188 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 HPGDSO60760 199 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 SPDEFO95238 335 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 CD28P10747 220 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 GYPEP15421 78 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 NFYAP23511 347 aaPredicted RBP6.6□□□□□ -1.35
PSEN1-209ENST00000553855 S100GP29377 79 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 CD40LGP29965 261 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 F2RL1P55085 397 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 KRTAP10-3P60369 221 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 HERV-K104P61576 105 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 TMEM267Q0VDI3 215 aaPredicted RBP6.6□□□□□ -1.35
PSEN1-209ENST00000553855 PMS2P11Q13670 270 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 CDK10Q15131 360 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 CTF1Q16619 201 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 C5orf64Q2M2E5 130 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 VMA21Q3ZAQ7 101 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 TEX38Q6PEX7 206 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 TMEM65Q6PI78 240 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 SNX29P2Q8IUI4 249 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 STPG2Q8N412 459 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 ZNF645Q8N7E2 425 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 OR5AP2Q8NGF4 316 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 OR5H2Q8NGV7 314 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 FAM110DQ8TAY7 271 aaPredicted RBP6.6□□□□□ -1.35
PSEN1-209ENST00000553855 R3HDM4Q96D70 268 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 SCPEP1Q9HB40 452 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 PARP11Q9NR21 331 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 SDHAF2Q9NX18 166 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 EXTL2Q9UBQ6 330 aa6.6□□□□□ -1.35
PSEN1-209ENST00000553855 IGKV1D-8A0A087WSZ0 117 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 A0A1W2PRX2 142 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 MEIS3P1A6NDR6 274 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 SULT1C2O00338 296 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 RRHO14718 337 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 CREBL2O60519 120 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-209ENST00000553855 CNIH1O95406 144 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 HLA-DRB1P01911 266 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 HLA-DQB1P01920 261 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 IFNA6P05013 189 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 EIF4EP06730 217 aaKnown RBP6.59□□□□□ -1.35
PSEN1-209ENST00000553855 FCER2P06734 321 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 FCGR2CP31995 323 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 TSPAN5P62079 268 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 CATR1Q13166 79 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 CXorf66Q5JRM2 361 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-209ENST00000553855 KCTD9Q7L273 389 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 ZNF329Q86UD4 541 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 TMEM17Q86X19 198 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 FAM71E2Q8N5Q1 922 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 GVQW1Q8N7I0 195 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 POC5Q8NA72 575 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 NUDT10Q8NFP7 164 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 NPBQ8NG41 125 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 SECTM1Q8WVN6 248 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 TCTEX1D2Q8WW35 142 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 NUDT11Q96G61 164 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 HARBI1Q96MB7 349 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 NOL4LQ96MY1 436 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-209ENST00000553855 HSD17B10Q99714 261 aaKnown RBP6.59□□□□□ -1.35
PSEN1-209ENST00000553855 CITED2Q99967 270 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-209ENST00000553855 AIFM2Q9BRQ8 373 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 C1orf43Q9BWL3 253 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 FBXL15Q9H469 300 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 ZFP57Q9NU63 452 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 EHFQ9NZC4 300 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 RABL2AQ9UBK7 228 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-209ENST00000553855 METTL1Q9UBP6 276 aaKnown RBP6.59□□□□□ -1.35
PSEN1-209ENST00000553855 RABL2BQ9UNT1 228 aa6.59□□□□□ -1.35
PSEN1-209ENST00000553855 ACTL6BO94805 426 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 TPPPO94811 219 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 NDUFA3O95167 84 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 PPYP01298 95 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 ELANEP08246 267 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 PTHLHP12272 177 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 ELK1P19419 428 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 SLC6A1P30531 599 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 DUTP33316 252 aaKnown RBP6.58□□□□□ -1.36
PSEN1-209ENST00000553855 RCVRNP35243 200 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 KIR2DS2P43631 304 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 FXYD4P59646 89 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 MRPS10P82664 201 aaKnown RBP6.58□□□□□ -1.36
PSEN1-209ENST00000553855 PSG5Q15238 335 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 FBLN7Q53RD9 439 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms