RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 LGALS14Q8TCE9 139 aa14.42□□□□□ -0.1
CHMP1A-207ENST00000549328 RHOVQ96L33 236 aa14.42□□□□□ -0.1
CHMP1A-207ENST00000549328 ALX4Q9H161 411 aaPredicted RBP14.42□□□□□ -0.1
CHMP1A-207ENST00000549328 RHBDL2Q9NX52 303 aa14.42□□□□□ -0.1
CHMP1A-207ENST00000549328 OR2W1Q9Y3N9 320 aa14.42□□□□□ -0.1
CHMP1A-207ENST00000549328 LSM4Q9Y4Z0 139 aaKnown RBP14.42□□□□□ -0.1
CHMP1A-207ENST00000549328 TMEM235A6NFC5 223 aa14.41□□□□□ -0.1
CHMP1A-207ENST00000549328 SRRM4A7MD48 611 aaKnown RBP14.41□□□□□ -0.1
CHMP1A-207ENST00000549328 SLC22A5O76082 557 aa14.41□□□□□ -0.1
CHMP1A-207ENST00000549328 HSPB1P04792 205 aaKnown RBP14.41□□□□□ -0.1
CHMP1A-207ENST00000549328 TPPP2P59282 170 aa14.41□□□□□ -0.1
CHMP1A-207ENST00000549328 PJVKQ0ZLH3 352 aa14.41□□□□□ -0.1
CHMP1A-207ENST00000549328 VAX1Q5SQQ9 334 aa14.41□□□□□ -0.1
CHMP1A-207ENST00000549328 CNIH2Q6PI25 160 aa14.41□□□□□ -0.1
CHMP1A-207ENST00000549328 GRPEL2Q8TAA5 225 aa14.41□□□□□ -0.1
CHMP1A-207ENST00000549328 DLX4Q92988 240 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-207ENST00000549328 MS4A10Q96PG2 267 aa14.41□□□□□ -0.1
CHMP1A-207ENST00000549328 ETV7Q9Y603 341 aa14.41□□□□□ -0.1
CHMP1A-207ENST00000549328 COL7A1Q02388 2944 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 TMEM127O75204 238 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 BRI3O95415 125 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 HLA-DQB1P01920 261 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 TRGV3P03979 118 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 CD36P16671 472 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 GNG2P59768 71 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 MXD1Q05195 221 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 VMA21Q3ZAQ7 101 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 ZNF645Q8N7E2 425 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 TEX45Q8NA69 505 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 POC5Q8NA72 575 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 OSR1Q8TAX0 266 aaPredicted RBP14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 NUDCD2Q8WVJ2 157 aa14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 ZNF256Q9Y2P7 627 aaPredicted RBP14.4□□□□□ -0.1
CHMP1A-207ENST00000549328 IGHV4OR15-8A0A075B7B6 117 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 A0A087WW49 117 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 A0A0A6YYH2 397 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 LOC100506127A0A0U1RQW1 187 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 A6NJ64 397 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 LINC00473A8K010 186 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 SSX5O60225 188 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 CLEC2LP0C7M8 214 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 UBE2KP61086 200 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 NEDD8Q15843 81 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 PRR25Q96S07 402 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 RNF167Q9H6Y7 350 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 ANXA10Q9UJ72 324 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 SORL1Q92673 2214 aa14.39□□□□□ -0.11
CHMP1A-207ENST00000549328 A0A0G2JLM5 398 aa14.38□□□□□ -0.11
CHMP1A-207ENST00000549328 CRYZL1O95825 349 aa14.38□□□□□ -0.11
CHMP1A-207ENST00000549328 IGHV3-11P01762 117 aa14.38□□□□□ -0.11
CHMP1A-207ENST00000549328 NFYAP23511 347 aaPredicted RBP14.38□□□□□ -0.11
CHMP1A-207ENST00000549328 SLURP1P55000 103 aa14.38□□□□□ -0.11
CHMP1A-207ENST00000549328 MRGPRG-AS1Q2M3A8 158 aa14.38□□□□□ -0.11
CHMP1A-207ENST00000549328 ACSM6Q6P461 480 aa14.38□□□□□ -0.11
CHMP1A-207ENST00000549328 OR5T1Q8NG75 326 aa14.38□□□□□ -0.11
CHMP1A-207ENST00000549328 ZNF355PQ9NSJ1 428 aa14.38□□□□□ -0.11
CHMP1A-207ENST00000549328 NHLRC4P0CG21 123 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-207ENST00000549328 PRSS8Q16651 343 aa14.37□□□□□ -0.11
CHMP1A-207ENST00000549328 TIMM50Q3ZCQ8 353 aa14.37□□□□□ -0.11
CHMP1A-207ENST00000549328 IDNKQ5T6J7 187 aa14.37□□□□□ -0.11
CHMP1A-207ENST00000549328 OR5H6Q8NGV6 325 aa14.37□□□□□ -0.11
CHMP1A-207ENST00000549328 SLC25A38Q96DW6 304 aa14.37□□□□□ -0.11
CHMP1A-207ENST00000549328 RANGRFQ9HD47 186 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-207ENST00000549328 RBMX2Q9Y388 322 aaKnown RBP14.37□□□□□ -0.11
CHMP1A-207ENST00000549328 PRELID3BQ9Y3B1 194 aa14.37□□□□□ -0.11
CHMP1A-207ENST00000549328 TNCP24821 2201 aa14.37□□□□□ -0.11
CHMP1A-207ENST00000549328 TRAV18A0A075B6X5 111 aa14.36□□□□□ -0.11
CHMP1A-207ENST00000549328 C13orf42A0A1B0GVH6 325 aa14.36□□□□□ -0.11
CHMP1A-207ENST00000549328 J3QRK9 145 aa14.36□□□□□ -0.11
CHMP1A-207ENST00000549328 SAP30O75446 220 aa14.36□□□□□ -0.11
CHMP1A-207ENST00000549328 TUSC2O75896 110 aa14.36□□□□□ -0.11
CHMP1A-207ENST00000549328 IGLV2-14P01704 120 aa14.36□□□□□ -0.11
CHMP1A-207ENST00000549328 C11orf87Q6NUJ2 197 aa14.36□□□□□ -0.11
CHMP1A-207ENST00000549328 OVCH2Q7RTZ1 564 aa14.36□□□□□ -0.11
CHMP1A-207ENST00000549328 HSD17B10Q99714 261 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-207ENST00000549328 DIABLOQ9NR28 239 aa14.36□□□□□ -0.11
CHMP1A-207ENST00000549328 MRPS7Q9Y2R9 242 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-207ENST00000549328 IGKV1D-13A0A0B4J2D9 117 aa14.35□□□□□ -0.11
CHMP1A-207ENST00000549328 MSGN1A6NI15 193 aa14.35□□□□□ -0.11
CHMP1A-207ENST00000549328 CREBL2O60519 120 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-207ENST00000549328 IGKV1-13P0DP09 117 aa14.35□□□□□ -0.11
CHMP1A-207ENST00000549328 ZP3P21754 424 aa14.35□□□□□ -0.11
CHMP1A-207ENST00000549328 AADACP22760 399 aa14.35□□□□□ -0.11
CHMP1A-207ENST00000549328 KCTD9Q7L273 389 aa14.35□□□□□ -0.11
CHMP1A-207ENST00000549328 CROCCP3Q8IVE0 287 aa14.35□□□□□ -0.11
CHMP1A-207ENST00000549328 BEST4Q8NFU0 473 aa14.35□□□□□ -0.11
CHMP1A-207ENST00000549328 TINAGL1Q9GZM7 467 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-207ENST00000549328 SPATA2Q9UM82 520 aa14.35□□□□□ -0.11
CHMP1A-207ENST00000549328 FCGR3BO75015 233 aa14.34□□□□□ -0.11
CHMP1A-207ENST00000549328 CDK10Q15131 360 aa14.34□□□□□ -0.11
CHMP1A-207ENST00000549328 TNXAQ16473 311 aa14.34□□□□□ -0.11
CHMP1A-207ENST00000549328 IDO2Q6ZQW0 420 aa14.34□□□□□ -0.11
CHMP1A-207ENST00000549328 HOGA1Q86XE5 327 aa14.34□□□□□ -0.11
CHMP1A-207ENST00000549328 USMG5Q96IX5 58 aa14.34□□□□□ -0.11
CHMP1A-207ENST00000549328 OR4C12Q96R67 309 aa14.34□□□□□ -0.11
CHMP1A-207ENST00000549328 PHB2Q99623 299 aa14.34□□□□□ -0.11
CHMP1A-207ENST00000549328 DCUN1D5Q9BTE7 237 aa14.34□□□□□ -0.11
CHMP1A-207ENST00000549328 ACTL6BO94805 426 aa14.33□□□□□ -0.12
CHMP1A-207ENST00000549328 LY86O95711 162 aa14.33□□□□□ -0.12
CHMP1A-207ENST00000549328 SAA1P0DJI8 122 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms