RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 SERPINB10P48595 397 aa9.83□□□□□ -0.84
PTCH1-218ENST00000548945 INSL4Q14641 139 aa9.83□□□□□ -0.84
PTCH1-218ENST00000548945 TMEM91Q6ZNR0 172 aa9.83□□□□□ -0.84
PTCH1-218ENST00000548945 ZNF383Q8NA42 475 aa9.83□□□□□ -0.84
PTCH1-218ENST00000548945 DCUN1D5Q9BTE7 237 aa9.83□□□□□ -0.84
PTCH1-218ENST00000548945 RSRP1Q9BUV0 290 aa9.83□□□□□ -0.84
PTCH1-218ENST00000548945 LPAR5Q9H1C0 372 aa9.83□□□□□ -0.84
PTCH1-218ENST00000548945 Q9N2K0 584 aa9.83□□□□□ -0.84
PTCH1-218ENST00000548945 C12orf4Q9NQ89 552 aa9.83□□□□□ -0.84
PTCH1-218ENST00000548945 SIGLEC8Q9NYZ4 499 aa9.83□□□□□ -0.84
PTCH1-218ENST00000548945 AK3Q9UIJ7 227 aa9.83□□□□□ -0.84
PTCH1-218ENST00000548945 FOXI3A8MTJ6 420 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-218ENST00000548945 SLC25A17O43808 307 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 ARL6IP5O75915 188 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 UCHL1P09936 223 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 ZNF182P17025 639 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-218ENST00000548945 AADACP22760 399 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 TAGLNQ01995 201 aaKnown RBP9.82□□□□□ -0.84
PTCH1-218ENST00000548945 HSD17B12Q53GQ0 312 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 ZFAND6Q6FIF0 208 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 CEACAM19Q7Z692 300 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 HAPLN4Q86UW8 402 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 DRAXINQ8NBI3 349 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-218ENST00000548945 OR9G4Q8NGQ1 327 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 GRPEL2Q8TAA5 225 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 DYNC2LI1Q8TCX1 351 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 RNF167Q9H6Y7 350 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 ZNF355PQ9NSJ1 428 aa9.82□□□□□ -0.84
PTCH1-218ENST00000548945 CCDC59Q9P031 241 aaKnown RBP9.82□□□□□ -0.84
PTCH1-218ENST00000548945 SOCS1O15524 211 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 CNIH1O95406 144 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 CRYGBP07316 175 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 SCTP09683 121 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 ARSBP15848 533 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 MYL9P24844 172 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 TGFBR1P36897 503 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 RANBP1P43487 201 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 SSBP2P81877 361 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-218ENST00000548945 HAGHQ16775 308 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 TATDN3Q17R31 274 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 IL34Q6ZMJ4 242 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 GTSCR1Q86UQ5 136 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 OR5T1Q8NG75 326 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 USMG5Q96IX5 58 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 HDHD3Q9BSH5 251 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-218ENST00000548945 THAP7Q9BT49 309 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-218ENST00000548945 TINAGL1Q9GZM7 467 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-218ENST00000548945 KCNK15Q9H427 330 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 SLC35D1Q9NTN3 355 aa9.81□□□□□ -0.84
PTCH1-218ENST00000548945 BIRC6Q9NR09 4857 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 IGKV1-6A0A0C4DH72 117 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 ANKRD34BA5PLL1 514 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 TRDCB7Z8K6 153 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 SLC17A2O00624 439 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 DIRAS3O95661 229 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 IGLV2-23P01705 113 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 IFNA6P05013 189 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 SNRPBP14678 240 aaKnown RBP9.8□□□□□ -0.84
PTCH1-218ENST00000548945 CALRP27797 417 aaKnown RBP9.8□□□□□ -0.84
PTCH1-218ENST00000548945 TMEM50BP56557 158 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 LCN12Q6JVE5 192 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 ZNF343Q6P1L6 599 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 Q8N402 240 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 OR4A4PQ8NGN8 299 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 CMSS1Q9BQ75 279 aaKnown RBP9.8□□□□□ -0.84
PTCH1-218ENST00000548945 GAR1Q9NY12 217 aaKnown RBP9.8□□□□□ -0.84
PTCH1-218ENST00000548945 RDH8Q9NYR8 311 aa9.8□□□□□ -0.84
PTCH1-218ENST00000548945 PEF1Q9UBV8 284 aaKnown RBP9.8□□□□□ -0.84
PTCH1-218ENST00000548945 TRAV1-2A0A0B4J238 106 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 M0R1X1 148 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 OR2A4O95047 310 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 SDC2P34741 201 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 SYNJ2BPP57105 145 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 LINC00205P59089 165 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 PJVKQ0ZLH3 352 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 CBX3Q13185 183 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 TMEM177Q53S58 311 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 TPRA1Q86W33 373 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 OR56B1Q8NGI3 324 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 OR2K2Q8NGT1 345 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 ARHGAP5-AS1Q96IT6 56 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 HARBI1Q96MB7 349 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 TSC22D3Q99576 134 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 PECRQ9BY49 303 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 TUBA4BQ9H853 241 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 PLGRKTQ9HBL7 147 aa9.79□□□□□ -0.84
PTCH1-218ENST00000548945 CSN3P07498 182 aa9.78□□□□□ -0.84
PTCH1-218ENST00000548945 RRASP10301 218 aa9.78□□□□□ -0.84
PTCH1-218ENST00000548945 RPS19P39019 145 aaKnown RBP9.78□□□□□ -0.84
PTCH1-218ENST00000548945 RORCP51449 518 aa9.78□□□□□ -0.84
PTCH1-218ENST00000548945 MECP2P51608 486 aaKnown RBP9.78□□□□□ -0.84
PTCH1-218ENST00000548945 MXD1Q05195 221 aa9.78□□□□□ -0.84
PTCH1-218ENST00000548945 P2RY14Q15391 338 aa9.78□□□□□ -0.84
PTCH1-218ENST00000548945 RAB11BQ15907 218 aa9.78□□□□□ -0.84
PTCH1-218ENST00000548945 CROCCP3Q8IVE0 287 aa9.78□□□□□ -0.84
PTCH1-218ENST00000548945 BVESQ8NE79 360 aa9.78□□□□□ -0.84
PTCH1-218ENST00000548945 IL17DQ8TAD2 202 aa9.78□□□□□ -0.84
PTCH1-218ENST00000548945 SNAPC3Q92966 411 aa9.78□□□□□ -0.84
PTCH1-218ENST00000548945 SLC25A46Q96AG3 418 aa9.78□□□□□ -0.84
PTCH1-218ENST00000548945 GFI1Q99684 422 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms