RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 LCN12Q6JVE5 192 aa9.48□□□□□ -0.89
COPS7A-221ENST00000546229 OR4A4PQ8NGN8 299 aa9.48□□□□□ -0.89
COPS7A-221ENST00000546229 USMG5Q96IX5 58 aa9.48□□□□□ -0.89
COPS7A-221ENST00000546229 CMSS1Q9BQ75 279 aaKnown RBP9.48□□□□□ -0.89
COPS7A-221ENST00000546229 FAM110AQ9BQ89 295 aa9.48□□□□□ -0.89
COPS7A-221ENST00000546229 URM1Q9BTM9 101 aaKnown RBP9.48□□□□□ -0.89
COPS7A-221ENST00000546229 WFDC10AQ9H1F0 79 aa9.48□□□□□ -0.89
COPS7A-221ENST00000546229 ZC4H2Q9NQZ6 224 aa9.48□□□□□ -0.89
COPS7A-221ENST00000546229 NKX1-2Q9UD57 310 aaPredicted RBP9.48□□□□□ -0.89
COPS7A-221ENST00000546229 ZNF221Q9UK13 617 aa9.48□□□□□ -0.89
COPS7A-221ENST00000546229 DNAH6Q9C0G6 4158 aa9.48□□□□□ -0.89
COPS7A-221ENST00000546229 TMEM272A0A1B0GTI8 110 aa9.47□□□□□ -0.89
COPS7A-221ENST00000546229 SHISA3A0PJX4 238 aa9.47□□□□□ -0.89
COPS7A-221ENST00000546229 LINC00473A8K010 186 aa9.47□□□□□ -0.89
COPS7A-221ENST00000546229 MFNGO00587 321 aa9.47□□□□□ -0.89
COPS7A-221ENST00000546229 APELAP0DMC3 54 aa9.47□□□□□ -0.89
COPS7A-221ENST00000546229 UBE2KP61086 200 aa9.47□□□□□ -0.89
COPS7A-221ENST00000546229 PRSS8Q16651 343 aa9.47□□□□□ -0.89
COPS7A-221ENST00000546229 OR2K2Q8NGT1 345 aa9.47□□□□□ -0.89
COPS7A-221ENST00000546229 SRSF12Q8WXF0 261 aaKnown RBP9.47□□□□□ -0.89
COPS7A-221ENST00000546229 PLEKHA3Q9HB20 300 aa9.47□□□□□ -0.89
COPS7A-221ENST00000546229 AKIP1Q9NQ31 210 aa9.47□□□□□ -0.89
COPS7A-221ENST00000546229 ZNF355PQ9NSJ1 428 aa9.47□□□□□ -0.89
COPS7A-221ENST00000546229 AK6Q9Y3D8 172 aaKnown RBP9.47□□□□□ -0.89
COPS7A-221ENST00000546229 CEPT1Q9Y6K0 416 aa9.47□□□□□ -0.89
COPS7A-221ENST00000546229 IGKV1D-8A0A087WSZ0 117 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 A0A1B0GW64 132 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 CD7P09564 240 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 OR9G9P0C7N8 305 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 GSTT2P0CG29 244 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 GSTT2BP0CG30 244 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 DUTP33316 252 aaKnown RBP9.46□□□□□ -0.9
COPS7A-221ENST00000546229 SERPINB10P48595 397 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 RAB11BQ15907 218 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 CD300EQ496F6 205 aaPredicted RBP9.46□□□□□ -0.9
COPS7A-221ENST00000546229 C10orf55Q5SWW7 151 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 IDO2Q6ZQW0 420 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 LAX1Q8IWV1 398 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 TMEM203Q969S6 136 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 FAM3DQ96BQ1 224 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 HERC2O95714 4834 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 VPS13DQ5THJ4 4388 aa9.46□□□□□ -0.9
COPS7A-221ENST00000546229 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.45□□□□□ -0.9
COPS7A-221ENST00000546229 MSGN1A6NI15 193 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 FAM223BA6NKX1 122 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 TEX22C9J3V5 150 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 RAB27BO00194 218 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 CNIH1O95406 144 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 IGLV2-14P01704 120 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 PRH1P02810 166 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 RHOGP84095 191 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 FABP5Q01469 135 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 EXOSC2Q13868 293 aaKnown RBP9.45□□□□□ -0.9
COPS7A-221ENST00000546229 RPEL1Q2QD12 228 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 KLK9Q2XQG4 91 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 C2orf76Q3KRA6 126 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 Q6ZS49 121 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 C19orf35Q6ZS72 473 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 GTSCR1Q86UQ5 136 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 FAM223AQ8IWN6 122 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 H1FOOQ8IZA3 346 aaPredicted RBP9.45□□□□□ -0.9
COPS7A-221ENST00000546229 TEX45Q8NA69 505 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 OR56B1Q8NGI3 324 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 MAFIPQ8WZ33 124 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 UFD1Q92890 307 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 DUSP21Q9H596 190 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 ZNF430Q9H8G1 570 aaPredicted RBP9.45□□□□□ -0.9
COPS7A-221ENST00000546229 PLGRKTQ9HBL7 147 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 COA4Q9NYJ1 87 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 KLK9Q9UKQ9 250 aa9.45□□□□□ -0.9
COPS7A-221ENST00000546229 BET1O15155 118 aa9.44□□□□□ -0.9
COPS7A-221ENST00000546229 SHOXO15266 292 aa9.44□□□□□ -0.9
COPS7A-221ENST00000546229 SAA1P0DJI8 122 aaPredicted RBP9.44□□□□□ -0.9
COPS7A-221ENST00000546229 CD81P60033 236 aa9.44□□□□□ -0.9
COPS7A-221ENST00000546229 TAGLNQ01995 201 aaKnown RBP9.44□□□□□ -0.9
COPS7A-221ENST00000546229 EIF4EBP1Q13541 118 aaPredicted RBP9.44□□□□□ -0.9
COPS7A-221ENST00000546229 MED22Q15528 200 aa9.44□□□□□ -0.9
COPS7A-221ENST00000546229 DEFB114Q30KQ6 69 aa9.44□□□□□ -0.9
COPS7A-221ENST00000546229 DEFB125Q8N687 156 aa9.44□□□□□ -0.9
COPS7A-221ENST00000546229 NEURL2Q9BR09 285 aa9.44□□□□□ -0.9
COPS7A-221ENST00000546229 C2orf70A6NJV1 201 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 E7EUB6 86 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 PTGES3LE9PB15 166 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 DENRO43583 198 aaKnown RBP9.43□□□□□ -0.9
COPS7A-221ENST00000546229 AIREO43918 545 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 CRYZL1O95825 349 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 IFNA6P05013 189 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 HIST1H1DP16402 221 aaKnown RBP9.43□□□□□ -0.9
COPS7A-221ENST00000546229 CALRP27797 417 aaKnown RBP9.43□□□□□ -0.9
COPS7A-221ENST00000546229 OR10A3P58181 314 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 BRWD1-AS2P59051 145 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 MLLT11Q13015 90 aaPredicted RBP9.43□□□□□ -0.9
COPS7A-221ENST00000546229 TNXAQ16473 311 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 RTL8BQ17RB0 113 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 NR2C2APQ86WQ0 139 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 TTC9CQ8N5M4 171 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 SNAPC3Q92966 411 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 CCDC140Q96MF4 163 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 TUBA4BQ9H853 241 aa9.43□□□□□ -0.9
COPS7A-221ENST00000546229 ELF5Q9UKW6 265 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms