RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 CA2P00918 260 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 OR8U8P0C7N1 319 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 NFYAP23511 347 aaPredicted RBP9.22□□□□□ -0.93
HDAC4-216ENST00000544989 CHRNA7P36544 502 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 KIR2DS2P43631 304 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 UBE2KP61086 200 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 LSM3P62310 102 aaKnown RBP9.22□□□□□ -0.93
HDAC4-216ENST00000544989 NDPQ00604 133 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 FXYD3Q14802 87 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 C19orf54Q5BKX5 351 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 TMEM69Q5SWH9 247 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 FOXB2Q5VYV0 432 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 UNQ5815/PRO19632Q6UWF5 114 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 ZNF66Q6ZN08 573 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 OVCH2Q7RTZ1 564 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 SAMD12Q8N8I0 201 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 ZNF491Q8N8L2 437 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 ZBTB34Q8NCN2 500 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 BVESQ8NE79 360 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 DDB2Q92466 427 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 RAX2Q96IS3 184 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 CLCC1Q96S66 551 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 AIFM2Q9BRQ8 373 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 RBMX2Q9Y388 322 aaKnown RBP9.22□□□□□ -0.93
HDAC4-216ENST00000544989 TENM3Q9P273 2699 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 DNAH3Q8TD57 4116 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 CRYZL1O95825 349 aa9.21□□□□□ -0.94
HDAC4-216ENST00000544989 IGLV2-23P01705 113 aa9.21□□□□□ -0.94
HDAC4-216ENST00000544989 APOA1P02647 267 aa9.21□□□□□ -0.94
HDAC4-216ENST00000544989 RORCP51449 518 aa9.21□□□□□ -0.94
HDAC4-216ENST00000544989 DCTN2Q13561 401 aaKnown RBP9.21□□□□□ -0.94
HDAC4-216ENST00000544989 MZT2AQ6P582 158 aa9.21□□□□□ -0.94
HDAC4-216ENST00000544989 C18orf65Q6ZTR6 163 aa9.21□□□□□ -0.94
HDAC4-216ENST00000544989 KCTD9Q7L273 389 aa9.21□□□□□ -0.94
HDAC4-216ENST00000544989 OR5AP2Q8NGF4 316 aa9.21□□□□□ -0.94
HDAC4-216ENST00000544989 OR4S2Q8NH73 311 aa9.21□□□□□ -0.94
HDAC4-216ENST00000544989 VSTM2AQ8TAG5 236 aa9.21□□□□□ -0.94
HDAC4-216ENST00000544989 AP3S1Q92572 193 aa9.21□□□□□ -0.94
HDAC4-216ENST00000544989 RBMXL1Q96E39 390 aaKnown RBP9.21□□□□□ -0.94
HDAC4-216ENST00000544989 MRPS26Q9BYN8 205 aaKnown RBP9.21□□□□□ -0.94
HDAC4-216ENST00000544989 A3GALT2U3KPV4 340 aa9.21□□□□□ -0.94
HDAC4-216ENST00000544989 A0A0G2JLM5 398 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 I3L521 148 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 ACTL6BO94805 426 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 CRYGBP07316 175 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 EGR2P11161 476 aaPredicted RBP9.2□□□□□ -0.94
HDAC4-216ENST00000544989 FCGR2CP31995 323 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 RAB25P57735 213 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 LINC00205P59089 165 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 TAS2R46P59540 309 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 ZNF616Q08AN1 781 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 EGFEM1PQ0D2K5 195 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 FHL3Q13643 280 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 CDK10Q15131 360 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 ANKRD13BQ86YJ7 626 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 GVQW1Q8N7I0 195 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 LFNGQ8NES3 379 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 OR11H1Q8NG94 326 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 GRPEL2Q8TAA5 225 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 GIMAP1Q8WWP7 306 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 C5orf30Q96GV9 206 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 DCUN1D5Q9BTE7 237 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 KLK15Q9H2R5 256 aa9.2□□□□□ -0.94
HDAC4-216ENST00000544989 IGKV1D-13A0A0B4J2D9 117 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 LINC00473A8K010 186 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 FCGR3BO75015 233 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 GABARAPO95166 117 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 BRI3O95415 125 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 PPYP01298 95 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 IGKV1-13P0DP09 117 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 AADACP22760 399 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 PRSS3P35030 304 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 TGFBR1P36897 503 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 INSL3P51460 131 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 TAS2R20P59543 309 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 VBP1P61758 197 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 NCS1P62166 190 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 GNB1P62873 340 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 CATR1Q13166 79 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 KIAA0141Q14154 515 aaPredicted RBP9.19□□□□□ -0.94
HDAC4-216ENST00000544989 C9orf66Q5T8R8 295 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 MMD2Q8IY49 270 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 OR1N2Q8NGR9 330 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 MRAPQ8TCY5 172 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 TCTEX1D2Q8WW35 142 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 SCPEP1Q9HB40 452 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 AURKAIP1Q9NWT8 199 aaPredicted RBP9.19□□□□□ -0.94
HDAC4-216ENST00000544989 COMMD3Q9UBI1 195 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 FBXO7Q9Y3I1 522 aa9.19□□□□□ -0.94
HDAC4-216ENST00000544989 SRRM4A7MD48 611 aaKnown RBP9.18□□□□□ -0.94
HDAC4-216ENST00000544989 J3QRK9 145 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 RBFOX2O43251 390 aaKnown RBP eCLIP9.18□□□□□ -0.948e-8■■■■■ 403.8
HDAC4-216ENST00000544989 RAMP3O60896 148 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 TPPPO94811 219 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 HRASP01112 189 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 LGALS1P09382 135 aaKnown RBP9.18□□□□□ -0.94
HDAC4-216ENST00000544989 TPPP2P59282 170 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 HERV-K104P61576 105 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 PRSS8Q16651 343 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 DEFB136Q30KP8 78 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms