RNA–Protein interactions for RNA: ENST00000544551.5

RDX-218, Transcript of radixin, humanhuman

TSL 2 BASIC

Gene RDX, Length 4,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-218ENST00000544551 TRGC1P0CF51 173 aa12.52□□□□□ -0.4
RDX-218ENST00000544551 LYL1P12980 280 aa12.52□□□□□ -0.4
RDX-218ENST00000544551 TNFSF10P50591 281 aa12.52□□□□□ -0.4
RDX-218ENST00000544551 MZT1Q08AG7 82 aa12.52□□□□□ -0.4
RDX-218ENST00000544551 BHLHA15Q7RTS1 189 aaPredicted RBP12.52□□□□□ -0.4
RDX-218ENST00000544551 SAXO1Q8IYX7 474 aa12.52□□□□□ -0.4
RDX-218ENST00000544551 LRTM2Q8N967 370 aa12.52□□□□□ -0.4
RDX-218ENST00000544551 OR5G3P0C626 314 aa12.52□□□□□ -0.4
RDX-218ENST00000544551 TNFAIP6P98066 277 aaPredicted RBP12.52□□□□□ -0.4
RDX-218ENST00000544551 PCSK4Q6UW60 755 aa12.52□□□□□ -0.4
RDX-218ENST00000544551 RNF138Q8WVD3 245 aa12.52□□□□□ -0.4
RDX-218ENST00000544551 UHRF2Q96PU4 802 aa12.52□□□□□ -0.4
RDX-218ENST00000544551 FAM103A1Q9BTL3 118 aaKnown RBP12.52□□□□□ -0.4
RDX-218ENST00000544551 QTRT1Q9BXR0 403 aaKnown RBP12.52□□□□□ -0.4
RDX-218ENST00000544551 TRGV10A0A0A0MS01 117 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 IGHV3-21A0A0B4J1V1 117 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 VSTM5A8MXK1 200 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 MT-CO2P00403 227 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 COX5BP10606 129 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 ERVFRD-1P60508 538 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 GNB1P62873 340 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 MRPS11P82912 194 aaKnown RBP12.52□□□□□ -0.41
RDX-218ENST00000544551 SPNS3Q6ZMD2 512 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 ZNF525Q8N782 197 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 CLDND2Q8NHS1 167 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 NEIL1Q96FI4 390 aaPredicted RBP12.52□□□□□ -0.41
RDX-218ENST00000544551 IER2Q9BTL4 223 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 PMS2P11Q13670 270 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 GTF3AQ92664 365 aaKnown RBP12.52□□□□□ -0.41
RDX-218ENST00000544551 SPSB4Q96A44 273 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 WDR61Q9GZS3 305 aaKnown RBP12.52□□□□□ -0.41
RDX-218ENST00000544551 SH2D2AQ9NP31 389 aa12.52□□□□□ -0.41
RDX-218ENST00000544551 IGKV3D-15A0A087WSY6 115 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 F6UZH7 168 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 OR4P4Q8NGL7 312 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 CYB5R3P00387 301 aaPredicted RBP12.51□□□□□ -0.41
RDX-218ENST00000544551 GYPAP02724 150 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 Q6ZPA2 131 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 OR10X1Q8NGY0 326 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 A8MXE2 369 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 MBP02144 154 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 CD1BP29016 333 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 ZNF645Q8N7E2 425 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 BOD1L1Q8NFC6 3051 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 OR10A7Q8NGE5 316 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 COMMD5Q9GZQ3 224 aa12.51□□□□□ -0.41
RDX-218ENST00000544551 IGHV3-72A0A0B4J1Y9 119 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 FAM209BQ5JX69 171 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 PACRGQ96M98 296 aaPredicted RBP12.5□□□□□ -0.41
RDX-218ENST00000544551 NAT8Q9UHE5 227 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 RALYQ9UKM9 306 aaKnown RBP12.5□□□□□ -0.41
RDX-218ENST00000544551 ACACBO00763 2458 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 DUXBA0A1W2PPF3 345 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 LRRC30A6NM36 301 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 SMIM6P0DI80 62 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 STUMQ69YW2 141 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 ZDHHC11Q9H8X9 412 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 NUP210LQ5VU65 1888 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 OR10J4P0C629 311 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 ERVFC1-1P60608 527 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 FAM27E3Q08E93 113 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 ASCL4Q6XD76 172 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 CISD2Q8N5K1 135 aaKnown RBP12.5□□□□□ -0.41
RDX-218ENST00000544551 OR2T10Q8NGZ9 312 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 POM121Q96HA1 1249 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 PARLQ9H300 379 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 GSN-AS1Q9NRJ2 163 aa12.5□□□□□ -0.41
RDX-218ENST00000544551 PRB4P10163 310 aaPredicted RBP12.49□□□□□ -0.41
RDX-218ENST00000544551 SERF2P84101 59 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 Q6ZT83 130 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 FAM216AQ8WUB2 273 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 CTXND1A0A1B0GTU2 59 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 LOC102723971A0A1B0GUV8 181 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 C1QTNF9BB2RNN3 333 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 C10orf142B7Z368 130 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 SPSB3Q6PJ21 355 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 IL22RA2Q969J5 263 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 GGACTQ9BVM4 153 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 TRAPPC1Q9Y5R8 145 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 A0A1W2PRD5 423 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 A0A1W2PRF3 423 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 A0A1W2PRM7 423 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 GZMHP20718 246 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 B2MP61769 119 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 COLCA1Q6ZS62 124 aa12.49□□□□□ -0.41
RDX-218ENST00000544551 CDX4O14627 284 aaPredicted RBP12.48□□□□□ -0.41
RDX-218ENST00000544551 PLAUP00749 431 aa12.48□□□□□ -0.41
RDX-218ENST00000544551 NTF3P20783 257 aa12.48□□□□□ -0.41
RDX-218ENST00000544551 GATA2P23769 480 aaPredicted RBP12.48□□□□□ -0.41
RDX-218ENST00000544551 HOXA6P31267 233 aa12.48□□□□□ -0.41
RDX-218ENST00000544551 GABRA6Q16445 453 aa12.48□□□□□ -0.41
RDX-218ENST00000544551 RPP25LQ8N5L8 163 aaKnown RBP12.48□□□□□ -0.41
RDX-218ENST00000544551 RBMXL3Q8N7X1 1067 aaKnown RBP12.48□□□□□ -0.41
RDX-218ENST00000544551 FAM122AQ96E09 287 aa12.48□□□□□ -0.41
RDX-218ENST00000544551 ELOVL1Q9BW60 279 aa12.48□□□□□ -0.41
RDX-218ENST00000544551 ZNF506Q5JVG8 444 aa12.48□□□□□ -0.41
RDX-218ENST00000544551 WDR86Q86TI4 376 aa12.48□□□□□ -0.41
RDX-218ENST00000544551 SGK494Q96LW2 274 aa12.48□□□□□ -0.41
RDX-218ENST00000544551 A0A1W2PNU3 283 aaPredicted RBP12.48□□□□□ -0.41
RDX-218ENST00000544551 PAX9P55771 341 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms