RNA–Protein interactions for RNA: ENST00000544487.5

CCDC189-207, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 2,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-207ENST00000544487 TEX36Q5VZQ5 186 aa17.3■□□□□ 0.36
CCDC189-207ENST00000544487 C20orf24Q9BUV8 137 aa17.3■□□□□ 0.36
CCDC189-207ENST00000544487 TMPRSS2O15393 492 aa17.29■□□□□ 0.36
CCDC189-207ENST00000544487 OR8U8P0C7N1 319 aa17.29■□□□□ 0.36
CCDC189-207ENST00000544487 RBPJQ06330 500 aa17.29■□□□□ 0.36
CCDC189-207ENST00000544487 AWAT1Q58HT5 328 aa17.29■□□□□ 0.36
CCDC189-207ENST00000544487 TAF15Q92804 592 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCDC189-207ENST00000544487 RAB7AP51149 207 aa17.29■□□□□ 0.36
CCDC189-207ENST00000544487 PRAMEF5Q5TYX0 476 aa17.29■□□□□ 0.36
CCDC189-207ENST00000544487 CIB3Q96Q77 187 aaPredicted RBP17.29■□□□□ 0.36
CCDC189-207ENST00000544487 S1PR3Q99500 378 aa17.29■□□□□ 0.36
CCDC189-207ENST00000544487 PARD6GQ9BYG4 376 aaPredicted RBP17.29■□□□□ 0.36
CCDC189-207ENST00000544487 HIPK2Q9H2X6 1198 aa17.29■□□□□ 0.36
CCDC189-207ENST00000544487 RAB9BQ9NP90 201 aa17.29■□□□□ 0.36
CCDC189-207ENST00000544487 RPS10P5Q9NQ39 176 aa17.29■□□□□ 0.36
CCDC189-207ENST00000544487 PRELID3BQ9Y3B1 194 aa17.29■□□□□ 0.36
CCDC189-207ENST00000544487 SAA2-SAA4A0A096LPE2 208 aa17.28■□□□□ 0.36
CCDC189-207ENST00000544487 M0R036 132 aa17.28■□□□□ 0.36
CCDC189-207ENST00000544487 ZZEF1O43149 2961 aa17.28■□□□□ 0.36
CCDC189-207ENST00000544487 HBE1P02100 147 aa17.28■□□□□ 0.36
CCDC189-207ENST00000544487 SAA2P0DJI9 122 aaPredicted RBP17.28■□□□□ 0.36
CCDC189-207ENST00000544487 DIRC2Q96SL1 478 aa17.28■□□□□ 0.36
CCDC189-207ENST00000544487 SMDT1Q9H4I9 107 aa17.28■□□□□ 0.36
CCDC189-207ENST00000544487 NDRG3Q9UGV2 375 aa17.28■□□□□ 0.36
CCDC189-207ENST00000544487 PMS2P5A8MQ11 134 aa17.27■□□□□ 0.36
CCDC189-207ENST00000544487 IFNA17P01571 189 aa17.27■□□□□ 0.36
CCDC189-207ENST00000544487 SNRNP70P08621 437 aaKnown RBP17.27■□□□□ 0.36
CCDC189-207ENST00000544487 ELLP55199 621 aaPredicted RBP17.27■□□□□ 0.36
CCDC189-207ENST00000544487 TMPRSS3P57727 454 aa17.27■□□□□ 0.36
CCDC189-207ENST00000544487 RAB2AP61019 212 aa17.27■□□□□ 0.36
CCDC189-207ENST00000544487 SERF2P84101 59 aa17.27■□□□□ 0.36
CCDC189-207ENST00000544487 TLE1Q04724 770 aa17.27■□□□□ 0.36
CCDC189-207ENST00000544487 ZNF726P1Q15940 193 aa17.27■□□□□ 0.36
CCDC189-207ENST00000544487 SSX7Q7RTT5 188 aa17.27■□□□□ 0.36
CCDC189-207ENST00000544487 CLDND2Q8NHS1 167 aa17.27■□□□□ 0.36
CCDC189-207ENST00000544487 RBMXL1Q96E39 390 aaKnown RBP17.27■□□□□ 0.36
CCDC189-207ENST00000544487 HCFC1P51610 2035 aa17.27■□□□□ 0.36
CCDC189-207ENST00000544487 IGF2RP11717 2491 aa17.27■□□□□ 0.36
CCDC189-207ENST00000544487 RBFOX2O43251 390 aaKnown RBP eCLIP17.27■□□□□ 0.35
CCDC189-207ENST00000544487 MMP23AO75900 390 aa17.27■□□□□ 0.35
CCDC189-207ENST00000544487 NDUFB7P17568 137 aa17.27■□□□□ 0.35
CCDC189-207ENST00000544487 GNG10P50151 68 aa17.27■□□□□ 0.35
CCDC189-207ENST00000544487 ICAM4Q14773 271 aa17.27■□□□□ 0.35
CCDC189-207ENST00000544487 SOHLH1Q5JUK2 328 aa17.27■□□□□ 0.35
CCDC189-207ENST00000544487 OR10P1Q8NGE3 313 aa17.27■□□□□ 0.35
CCDC189-207ENST00000544487 DDB2Q92466 427 aa17.27■□□□□ 0.35
CCDC189-207ENST00000544487 SAP30LQ9HAJ7 183 aa17.27■□□□□ 0.35
CCDC189-207ENST00000544487 H7C2Y5 167 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 ITGB1BP1O14713 200 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 FBP1P09467 338 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 CEBPGP53567 150 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 LCN15Q6UWW0 184 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 LYG1Q8N1E2 194 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 IDI2-AS1Q9NZ38 188 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 TRAV1-1A0A0B4J248 108 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 TRGV8A0A0C4DH27 118 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 C7orf77A4D0Y5 90 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 GFRA3O60609 400 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 SCAF4O95104 1147 aaKnown RBP17.26■□□□□ 0.35
CCDC189-207ENST00000544487 ERVK-16P61578 105 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 SSX8Q7RTT4 187 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 OR4A16Q8NH70 328 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 RXFP4Q8TDU9 374 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 RCC1LQ96I51 464 aaKnown RBP17.26■□□□□ 0.35
CCDC189-207ENST00000544487 TMEM147Q9BVK8 224 aa17.26■□□□□ 0.35
CCDC189-207ENST00000544487 ZNF729A6NN14 1252 aaPredicted RBP17.25■□□□□ 0.35
CCDC189-207ENST00000544487 NQO2P16083 231 aa17.25■□□□□ 0.35
CCDC189-207ENST00000544487 FGF8P55075 233 aaPredicted RBP17.25■□□□□ 0.35
CCDC189-207ENST00000544487 NHLH1Q02575 133 aa17.25■□□□□ 0.35
CCDC189-207ENST00000544487 TMEM41BQ5BJD5 291 aa17.25■□□□□ 0.35
CCDC189-207ENST00000544487 ZNF506Q5JVG8 444 aa17.25■□□□□ 0.35
CCDC189-207ENST00000544487 ZNF439Q8NDP4 499 aa17.25■□□□□ 0.35
CCDC189-207ENST00000544487 NEUROG1Q92886 237 aa17.25■□□□□ 0.35
CCDC189-207ENST00000544487 PINX1Q96BK5 328 aaKnown RBP17.25■□□□□ 0.35
CCDC189-207ENST00000544487 CLCC1Q96S66 551 aa17.25■□□□□ 0.35
CCDC189-207ENST00000544487 VKORC1Q9BQB6 163 aa17.25■□□□□ 0.35
CCDC189-207ENST00000544487 ZNF251Q9BRH9 671 aa17.25■□□□□ 0.35
CCDC189-207ENST00000544487 SMCO4Q9NRQ5 59 aa17.25■□□□□ 0.35
CCDC189-207ENST00000544487 GNG13Q9P2W3 67 aa17.25■□□□□ 0.35
CCDC189-207ENST00000544487 RAXQ9Y2V3 346 aa17.25■□□□□ 0.35
CCDC189-207ENST00000544487 TRAV3A0A0B4J244 114 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 NKX6-3A6NJ46 265 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 SRP19P09132 144 aaKnown RBP17.24■□□□□ 0.35
CCDC189-207ENST00000544487 ERVFRD-1P60508 538 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 ATP6V1FQ16864 119 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 CCL17Q92583 94 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 TMEM140Q9NV12 185 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 GAB2Q9UQC2 676 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 PUS1Q9Y606 427 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCDC189-207ENST00000544487 RELNP78509 3460 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 FAM90A9PA6NNJ1 464 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 SHISA9B4DS77 424 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 EIF3GO75821 320 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCDC189-207ENST00000544487 DAOP14920 347 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 PLA2G5P39877 138 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 KIR2DS2P43631 304 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 MRPS11P82912 194 aaKnown RBP17.24■□□□□ 0.35
CCDC189-207ENST00000544487 AARDQ4LEZ3 155 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 ZNF787Q6DD87 383 aa17.24■□□□□ 0.35
CCDC189-207ENST00000544487 OR4S2Q8NH73 311 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms