RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SSBP2P81877 361 aaPredicted RBP12.39□□□□□ -0.43
RPAIN-206ENST00000539417 TMEM177Q53S58 311 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 PYHIN1Q6K0P9 492 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 LIN54Q6MZP7 749 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 KCTD9Q7L273 389 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 FCAMRQ8WWV6 532 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 HARBI1Q96MB7 349 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 KIAA1456Q9P272 454 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 PSMB11A5LHX3 300 aa12.38□□□□□ -0.43
RPAIN-206ENST00000539417 G3V318 75 aa12.38□□□□□ -0.43
RPAIN-206ENST00000539417 ATP6V0E1O15342 81 aa12.38□□□□□ -0.43
RPAIN-206ENST00000539417 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-206ENST00000539417 HERV-K104P61576 105 aa12.38□□□□□ -0.43
RPAIN-206ENST00000539417 NSUN5P1Q3KNT7 163 aa12.38□□□□□ -0.43
RPAIN-206ENST00000539417 FAAP20Q6NZ36 180 aa12.38□□□□□ -0.43
RPAIN-206ENST00000539417 LCNL1Q6ZST4 164 aa12.38□□□□□ -0.43
RPAIN-206ENST00000539417 SMIM4Q8WVI0 70 aa12.38□□□□□ -0.43
RPAIN-206ENST00000539417 TCTEX1D2Q8WW35 142 aa12.38□□□□□ -0.43
RPAIN-206ENST00000539417 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
RPAIN-206ENST00000539417 RNF5Q99942 180 aa12.38□□□□□ -0.43
RPAIN-206ENST00000539417 WSB1Q9Y6I7 421 aa12.38□□□□□ -0.43
RPAIN-206ENST00000539417 A0A1W2PRX2 142 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 FABP12A6NFH5 140 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 CTDSPLO15194 276 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 SLC22A5O76082 557 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 CX3CL1P78423 397 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 CD83Q01151 205 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 CFHR3Q02985 330 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 VAX1Q5SQQ9 334 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 AADACL3Q5VUY0 350 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 IDO2Q6ZQW0 420 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 OR6F1Q8NGZ6 308 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 TSNAXQ99598 290 aaKnown RBP12.37□□□□□ -0.43
RPAIN-206ENST00000539417 HSD17B10Q99714 261 aaKnown RBP12.37□□□□□ -0.43
RPAIN-206ENST00000539417 FAM103A1Q9BTL3 118 aaKnown RBP12.37□□□□□ -0.43
RPAIN-206ENST00000539417 MMP27Q9H306 513 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 OR51J1Q9H342 316 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 PARP11Q9NR21 331 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 V9GYH0 126 aa12.37□□□□□ -0.43
RPAIN-206ENST00000539417 AP4M1O00189 453 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 ARPC1BO15143 372 aaKnown RBP12.36□□□□□ -0.43
RPAIN-206ENST00000539417 SHOXO15266 292 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 RAMP3O60896 148 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 CA2P00918 260 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 IGF1P05019 195 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 ZNF735P0CB33 412 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 TSPAN5P62079 268 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 PLGLAQ15195 96 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 ZNF79Q15937 498 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 RTL8BQ17RB0 113 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 PRR31Q5SQ13 230 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 C18orf65Q6ZTR6 163 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 FOXRED2Q8IWF2 684 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 VKORC1L1Q8N0U8 176 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 TMEM229BQ8NBD8 167 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 SGMS2Q8NHU3 365 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 CHPT1Q8WUD6 406 aa12.36□□□□□ -0.43
RPAIN-206ENST00000539417 KCNAB3O43448 404 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 SPDEFO95238 335 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 CD74P04233 296 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 RRASP10301 218 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 TAGLNQ01995 201 aaKnown RBP12.35□□□□□ -0.43
RPAIN-206ENST00000539417 MSMO1Q15800 293 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 RNASE10Q5GAN6 216 aaKnown RBP12.35□□□□□ -0.43
RPAIN-206ENST00000539417 ZNF66Q6ZN08 573 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 CCDC190Q86UF4 302 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 LHFPL1Q86WI0 220 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 OR51H1Q8NH63 302 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 C15orf40Q8WUR7 153 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 MRGPRFQ96AM1 343 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 A3GALT2U3KPV4 340 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 NBEAL1Q6ZS30 2694 aa12.35□□□□□ -0.43
RPAIN-206ENST00000539417 GSTZ1O43708 216 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-206ENST00000539417 PGLYRP1O75594 196 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-206ENST00000539417 LGALS7P47929 136 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 MRPS10P82664 201 aaKnown RBP12.34□□□□□ -0.43
RPAIN-206ENST00000539417 PHLDA2Q53GA4 152 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 C19orf54Q5BKX5 351 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 STEAP1BQ6NZ63 245 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 ZBTB34Q8NCN2 500 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 PRELID3BQ9Y3B1 194 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 FBN3Q75N90 2809 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 TCRBV4S1A1TA0A5B7 111 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 SOX15O60248 233 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 RLN1P04808 185 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 SAA1P0DJI8 122 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-206ENST00000539417 PI3P19957 117 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 PPIFP30405 207 aaKnown RBP12.34□□□□□ -0.43
RPAIN-206ENST00000539417 TAS2R19P59542 299 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 ACTBL2Q562R1 376 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 PPP1R27Q86WC6 154 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 SPAG16Q8N0X2 631 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 OR6Q1Q8NGQ2 317 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 OSR1Q8TAX0 266 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-206ENST00000539417 FAM110DQ8TAY7 271 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-206ENST00000539417 CASTOR1Q8WTX7 329 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 RSRP1Q9BUV0 290 aa12.34□□□□□ -0.43
RPAIN-206ENST00000539417 WNK1Q9H4A3 2382 aa12.33□□□□□ -0.44
RPAIN-206ENST00000539417 M0QZ24 198 aa12.33□□□□□ -0.44
RPAIN-206ENST00000539417 RAB3DO95716 219 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms