RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 HOXB5P09067 269 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 CT45A6P0DMU7 189 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 CT45A5P0DMU8 189 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 CT45A7P0DMV0 189 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 PAX6P26367 422 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 LPAR6P43657 344 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 RTL8BQ17RB0 113 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 BRD3OSQ6XYD6 125 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 OR4S2Q8NH73 311 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 LHFPL5Q8TAF8 219 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 IGHV1-3A0A0C4DH29 117 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 H0YJW9 148 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 LY6LH3BQJ8 138 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 RAMP3O60896 148 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 CRYZL1O95825 349 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 RPA2P15927 270 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 AKR1C2P52895 323 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 SSX2Q16385 188 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 MIDNQ504T8 468 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 LDLRAD2Q5SZI1 272 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 SLC35G3Q8N808 338 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 GLYATL2Q8WU03 294 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 C17orf50Q8WW18 174 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 DDB2Q92466 427 aa11.43□□□□□ -0.58
CD4-208ENST00000538827 RBMXL1Q96E39 390 aaKnown RBP11.43□□□□□ -0.58
CD4-208ENST00000538827 A0A0B4J2A0 478 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 A0A1W2PPI3 338 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 INAFM1C9JVW0 142 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 TIMM23O14925 209 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 ADAP1O75689 374 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 RAB13P51153 203 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 ERVK-16P61578 105 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 C2orf68Q2NKX9 166 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 KLF17Q5JT82 389 aaPredicted RBP11.42□□□□□ -0.58
CD4-208ENST00000538827 CCDC144NLQ6NUI1 221 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 PDPNQ86YL7 162 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 SELENOHQ8IZQ5 122 aaKnown RBP11.42□□□□□ -0.58
CD4-208ENST00000538827 OR8H3Q8N146 312 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 TCTEX1D1Q8N7M0 179 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 OR11H7Q8NGC8 314 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 CD300LFQ8TDQ1 290 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 RBPMSQ93062 196 aaKnown RBP11.42□□□□□ -0.58
CD4-208ENST00000538827 CHIAQ9BZP6 476 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 YAE1D1Q9NRH1 226 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 SHPKQ9UHJ6 478 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 WASHC3Q9Y3C0 194 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 ABCA1O95477 2261 aa11.42□□□□□ -0.58
CD4-208ENST00000538827 C13orf42A0A1B0GVH6 325 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 C5orf51A6NDU8 294 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 HMX3A6NHT5 357 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 CD5LO43866 347 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 SIX6O95475 246 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 IFNA21P01568 189 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 SULT1A3P0DMM9 295 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 SULT1A4P0DMN0 295 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 RRASP10301 218 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 ARHGDIBP52566 201 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 CD83Q01151 205 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 ZNF585BQ52M93 769 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 GGNBP1Q5YKI7 109 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 DHRS7BQ6IAN0 325 aaPredicted RBP11.41□□□□□ -0.58
CD4-208ENST00000538827 LYZL2Q7Z4W2 148 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 DYNAPQ8N1N2 210 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 IL22RA2Q969J5 263 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 R3HDM4Q96D70 268 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 HARBI1Q96MB7 349 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 PDCD10Q9BUL8 212 aa11.41□□□□□ -0.58
CD4-208ENST00000538827 A0A0U1RQK1 487 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 OOSP1A8MZH6 123 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 SHOXO15266 292 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 RBFOX2O43251 390 aaKnown RBP eCLIP11.4□□□□□ -0.58
CD4-208ENST00000538827 ATG12O94817 140 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 CDS2O95674 445 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 HPRT1P00492 218 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 IGKV1-39P01597 117 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 IGKV1D-39P04432 117 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 TRAPPC2P0DI81 140 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 TRAPPC2BP0DI82 140 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 CXCL3P19876 107 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 G6PCP35575 357 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 THOC7Q6I9Y2 204 aaKnown RBP11.4□□□□□ -0.58
CD4-208ENST00000538827 GSG1LQ6UXU4 331 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 IL17RELQ6ZVW7 336 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 SSX9Q7RTT3 188 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 AKAP14Q86UN6 197 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 DMBX1Q8NFW5 382 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 OR5AN1Q8NGI8 311 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 OR5M8Q8NGP6 311 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 TMEM158Q8WZ71 300 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 MALSU1Q96EH3 234 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 TMEM56Q96MV1 263 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 MS4A7Q9GZW8 240 aaPredicted RBP11.4□□□□□ -0.58
CD4-208ENST00000538827 RAB18Q9NP72 206 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 FAM212BQ9NTI7 297 aaPredicted RBP11.4□□□□□ -0.58
CD4-208ENST00000538827 COMMD9Q9P000 198 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 FAM96BQ9Y3D0 163 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 TMEM56-RWDD3S4R434 201 aa11.4□□□□□ -0.58
CD4-208ENST00000538827 PIGBOS1A0A0B4J2F0 54 aa11.39□□□□□ -0.59
CD4-208ENST00000538827 DUXBA0A1W2PPF3 345 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms