RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 NKX6-2Q9C056 277 aaPredicted RBP-0.7□□□□□ -2.52
COPB1-212ENST00000534771 NDEL1Q9GZM8 345 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 CHRNA10Q9GZZ6 450 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 TMEM222Q9H0R3 208 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 MED28Q9H204 178 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 FBXL15Q9H469 300 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 ACOT13Q9NPJ3 140 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 MS4A12Q9NXJ0 267 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 ZMAT5Q9UDW3 170 aaKnown RBP-0.7□□□□□ -2.52
COPB1-212ENST00000534771 RBM7Q9Y580 266 aaKnown RBP-0.7□□□□□ -2.52
COPB1-212ENST00000534771 PTPRSQ13332 1948 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 HECTD4Q9Y4D8 3996 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 KIAA1549Q9HCM3 1950 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 EP300Q09472 2414 aaPredicted RBP-0.7□□□□□ -2.52
COPB1-212ENST00000534771 NUP160Q12769 1436 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 CENPXA8MT69 81 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 AKR7A2O43488 359 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 GMDSO60547 372 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 IGLV3-27P01718 113 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 PMP2P02689 132 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 GADD45AP24522 165 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 IVDP26440 423 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 GABRR2P28476 465 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 GRPRP30550 384 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 NUP62P37198 522 aaPredicted RBP-0.71□□□□□ -2.52
COPB1-212ENST00000534771 CSKP41240 450 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 PSMB3P49720 205 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 SULT1A2P50226 295 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 FXYD7P58549 80 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 PSMC5P62195 406 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 PSG9Q00887 426 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 ZNF345Q14585 488 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 MPV17LQ2QL34 196 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 ACSM3Q53FZ2 586 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 SPANXN2Q5MJ10 180 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 BZW1Q7L1Q6 419 aaKnown RBP-0.71□□□□□ -2.52
COPB1-212ENST00000534771 TAS2R42Q7RTR8 314 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 DOLPP1Q86YN1 238 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 ATOH7Q8N100 152 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 RPP25LQ8N5L8 163 aaKnown RBP-0.71□□□□□ -2.52
COPB1-212ENST00000534771 DAND5Q8N907 189 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 TMEM75Q8N9X5 138 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 OR13C8Q8NGS7 320 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 OR13C9Q8NGT0 318 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 OR11L1Q8NGX0 322 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 DOK4Q8TEW6 326 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 TFGQ92734 400 aaPredicted RBP-0.71□□□□□ -2.52
COPB1-212ENST00000534771 CENPNQ96H22 339 aaPredicted RBP-0.71□□□□□ -2.52
COPB1-212ENST00000534771 ABHD14BQ96IU4 210 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 NMNAT3Q96T66 252 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 C11orf70Q9BRQ4 267 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 BEX2Q9BXY8 128 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 BLZF1Q9H2G9 400 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 LZTFL1Q9NQ48 299 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 COX16Q9P0S2 106 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 RRP15Q9Y3B9 282 aaKnown RBP-0.71□□□□□ -2.52
COPB1-212ENST00000534771 COL6A3P12111 3177 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 DSCAMO60469 2012 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 SIPA1L1O43166 1804 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 RAB3GAP2Q9H2M9 1393 aa-0.71□□□□□ -2.52
COPB1-212ENST00000534771 TRBV10-2A0A0K0K1G8 114 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 GSTZ1O43708 216 aaPredicted RBP-0.72□□□□□ -2.52
COPB1-212ENST00000534771 DNAL4O96015 105 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 MSMBP08118 114 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 AKR1C4P17516 323 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 ARR3P36575 388 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 DAPP51397 102 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 RAB4BP61018 213 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 TSPAN5P62079 268 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 BTN3A2P78410 334 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 LCN2P80188 198 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 STX4Q12846 297 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 SPRNQ5BIV9 151 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 LPCAT4Q643R3 524 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 SOSTDC1Q6X4U4 206 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 FAM19A1Q7Z5A9 133 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 CLECL1Q8IZS7 167 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 PLPP5Q8NEB5 264 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 PXT1Q8NFP0 134 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 RORBQ92753 470 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 ZMYND19Q96E35 227 aaPredicted RBP-0.72□□□□□ -2.52
COPB1-212ENST00000534771 FAM192AQ9GZU8 254 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 SDHAF2Q9NX18 166 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 TMEM216Q9P0N5 145 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 NAT8Q9UHE5 227 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 LINC00527Q9UJ94 153 aa-0.72□□□□□ -2.52
COPB1-212ENST00000534771 POLR3HQ9Y535 204 aaPredicted RBP-0.72□□□□□ -2.52
COPB1-212ENST00000534771 GREB1Q4ZG55 1949 aa-0.72□□□□□ -2.53
COPB1-212ENST00000534771 ABCA12Q86UK0 2595 aa-0.72□□□□□ -2.53
COPB1-212ENST00000534771 USP9XQ93008 2570 aaPredicted RBP-0.72□□□□□ -2.53
COPB1-212ENST00000534771 MYCBP2O75592 4640 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 DNHD1Q96M86 4753 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 FAT3Q8TDW7 4589 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 FLGP20930 4061 aaPredicted RBP-0.73□□□□□ -2.53
COPB1-212ENST00000534771 PHRF1Q9P1Y6 1649 aaKnown RBP-0.73□□□□□ -2.53
COPB1-212ENST00000534771 A0A087WUU8 490 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 TRBV6-8A0A0A6YYG3 113 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 GOLGA6L19H0YKK7 550 aa-0.73□□□□□ -2.53
COPB1-212ENST00000534771 CRXO43186 299 aaPredicted RBP-0.73□□□□□ -2.53
COPB1-212ENST00000534771 CYTH3O43739 400 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms