RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 MARCH11A6NNE9 402 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 MMP23AO75900 390 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 CYB5R3P00387 301 aaPredicted RBP5.86□□□□□ -1.47
RNPC3-209ENST00000533834 SNRNP70P08621 437 aaKnown RBP5.86□□□□□ -1.47
RNPC3-209ENST00000533834 PRR20EP86478 221 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 PRR20CP86479 221 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 PRR20DP86480 221 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 PRR20BP86481 221 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 PRR20AP86496 221 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 EIF2S3LQ2VIR3 472 aaKnown RBP5.86□□□□□ -1.47
RNPC3-209ENST00000533834 DMRTC2Q8IXT2 367 aaPredicted RBP5.86□□□□□ -1.47
RNPC3-209ENST00000533834 NUP37Q8NFH4 326 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 GALMQ96C23 342 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 MSL2Q9HCI7 577 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 USF3Q68DE3 2245 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 ITPR1Q14643 2758 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 PIGBOS1A0A0B4J2F0 54 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 NXPH2O95156 264 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 LINC00869P0C866 280 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 PRDX2P32119 198 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 LINC00310P59036 64 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 RPL15P61313 204 aaKnown RBP5.86□□□□□ -1.47
RNPC3-209ENST00000533834 ARSJQ5FYB0 599 aaPredicted RBP5.86□□□□□ -1.47
RNPC3-209ENST00000533834 PYY3Q5JQD4 70 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 TIMM23BQ5SRD1 257 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 BHLHA15Q7RTS1 189 aaPredicted RBP5.86□□□□□ -1.47
RNPC3-209ENST00000533834 MRGPRGQ86SM5 289 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 TPRX1Q8N7U7 411 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 MRGPRDQ8TDS7 321 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 HSD17B10Q99714 261 aaKnown RBP5.86□□□□□ -1.47
RNPC3-209ENST00000533834 EIF5A2Q9GZV4 153 aaKnown RBP5.86□□□□□ -1.47
RNPC3-209ENST00000533834 TMPRSS5Q9H3S3 457 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 GCM1Q9NP62 436 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 TRAPPC2LQ9UL33 140 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 FOXA2Q9Y261 457 aaPredicted RBP5.86□□□□□ -1.47
RNPC3-209ENST00000533834 AKAP9Q99996 3911 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 ZDBF2Q9HCK1 2354 aa5.86□□□□□ -1.47
RNPC3-209ENST00000533834 YLPM1P49750 1951 aaKnown RBP5.85□□□□□ -1.47
RNPC3-209ENST00000533834 GPR179Q6PRD1 2367 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 IGKV1OR2-108A0A075B7D4 117 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 ZNF729A6NN14 1252 aaPredicted RBP5.85□□□□□ -1.47
RNPC3-209ENST00000533834 DEFA4P12838 97 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 RPL23P62829 140 aaKnown RBP5.85□□□□□ -1.47
RNPC3-209ENST00000533834 TLE1Q04724 770 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 TLE4Q04727 773 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 SLC38A11Q08AI6 406 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 BTNL3Q6UXE8 466 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 TREML4Q6UXN2 200 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 OR51G1Q8NGK1 321 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 TVP23CQ96ET8 276 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 BCL2L14Q9BZR8 327 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 VAX2Q9UIW0 290 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 AP4M1O00189 453 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 TSPAN9O75954 239 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 GRPP07492 148 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 SELLP14151 372 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 ATP6V1FQ16864 119 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 KRBOX4Q5JUW0 171 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 ZNF788Q6ZQV5 615 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 ZNF383Q8NA42 475 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 IL1F10Q8WWZ1 152 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 NEUROG1Q92886 237 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 S100PBPQ96BU1 408 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 SNX22Q96L94 193 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 TMEM250H0YL14 139 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 ST8SIA5O15466 376 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 GGCTO75223 188 aaKnown RBP5.85□□□□□ -1.47
RNPC3-209ENST00000533834 KBTBD11O94819 623 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 CDX1P47902 265 aaPredicted RBP5.85□□□□□ -1.47
RNPC3-209ENST00000533834 FGF8P55075 233 aaPredicted RBP5.85□□□□□ -1.47
RNPC3-209ENST00000533834 RPL23AP62750 156 aaKnown RBP5.85□□□□□ -1.47
RNPC3-209ENST00000533834 FABP9Q0Z7S8 132 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 PRSS8Q16651 343 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 SOHLH1Q5JUK2 328 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 GFI1BQ5VTD9 330 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 TRAT1Q6PIZ9 186 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 ZNF833PQ6ZTB9 187 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 DEFB124Q8NES8 71 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 OR10A7Q8NGE5 316 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 ST6GALNAC6Q969X2 333 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 HIST1H2AAQ96QV6 131 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 RNF150Q9ULK6 438 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 FZR1Q9UM11 496 aa5.85□□□□□ -1.47
RNPC3-209ENST00000533834 A0A087X0M5 115 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 TRAV17A0A0B4J275 112 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 IGHV3-64DA0A0J9YX35 117 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 A0A1B0GX30 115 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 SRRM4A7MD48 611 aaKnown RBP5.84□□□□□ -1.47
RNPC3-209ENST00000533834 LINC00587B1AMM8 73 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 FNDC10F2Z333 226 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 OR2C1O95371 312 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 IGHV1-46P01743 117 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 ZNF137PP52743 207 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 PNRC1Q12796 327 aaPredicted RBP5.84□□□□□ -1.47
RNPC3-209ENST00000533834 RPL39P5Q59GN2 51 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 GCSAMLQ5JQS6 135 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 P4HA3Q7Z4N8 544 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 ZNF114Q8NC26 417 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 DTD1Q8TEA8 209 aa5.84□□□□□ -1.47
RNPC3-209ENST00000533834 FRZBQ92765 325 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms