RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 DYNC2H1Q8NCM8 4307 aaKnown RBP8.68□□□□□ -1.02
VPS28-214ENST00000531032 SMIM30A4D0T7 59 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 METTL21EPA6NDL7 271 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 CNIH1O95406 144 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 DIRAS3O95661 229 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 GALP22466 123 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 TALDO1P37837 337 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 PJVKQ0ZLH3 352 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 ZNF773Q6PK81 442 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 IL34Q6ZMJ4 242 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 SGPP2Q8IWX5 399 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 SPARTQ8N0X7 666 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 OR5T1Q8NG75 326 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 OR9G4Q8NGQ1 327 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 CABLES2Q9BTV7 478 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 OR2D2Q9H210 308 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 EDA2RQ9HAV5 297 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 PALMDQ9NP74 551 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 KCNK7Q9Y2U2 307 aa8.67□□□□□ -1.02
VPS28-214ENST00000531032 A0A0B4J203 849 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 LCE6AA0A183 80 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 ANKRD34BA5PLL1 514 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 FABP7O15540 132 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 FCGR3AP08637 254 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 RAB6AP20340 208 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 AADACP22760 399 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 TAGLNQ01995 201 aaKnown RBP8.66□□□□□ -1.02
VPS28-214ENST00000531032 ARFRP1Q13795 201 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 MRGPRG-AS1Q2M3A8 158 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 TMEM177Q53S58 311 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 IGSF11Q5DX21 431 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 ZNF343Q6P1L6 599 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 OR10R2Q8NGX6 335 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 ISOC1Q96CN7 298 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 C5orf30Q96GV9 206 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 HARBI1Q96MB7 349 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 THAP7Q9BT49 309 aaPredicted RBP8.66□□□□□ -1.02
VPS28-214ENST00000531032 TINAGL1Q9GZM7 467 aaPredicted RBP8.66□□□□□ -1.02
VPS28-214ENST00000531032 ATG5Q9H1Y0 275 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 SDHAF2Q9NX18 166 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 SIGLEC8Q9NYZ4 499 aa8.66□□□□□ -1.02
VPS28-214ENST00000531032 TRBV6-7A0A0A0MS04 114 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 SHISA3A0PJX4 238 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 SRRM4A7MD48 611 aaKnown RBP8.65□□□□□ -1.02
VPS28-214ENST00000531032 NOTOA8MTQ0 251 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 H0Y980 276 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 BET1O15155 118 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 HIST1H1DP16402 221 aaKnown RBP8.65□□□□□ -1.02
VPS28-214ENST00000531032 GNB3P16520 340 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 SYNJ2BPP57105 145 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 DEFA5Q01523 94 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 PLA2G7Q13093 441 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 DYRK1AQ13627 763 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 ARL6IP1Q15041 203 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 NEDD8Q15843 81 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 OR10J5Q8NHC4 309 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 USMG5Q96IX5 58 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 LYSTQ99698 3801 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 SPATA25Q9BR10 227 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 GINS4Q9BRT9 223 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 VCX3AQ9NNX9 186 aa8.65□□□□□ -1.02
VPS28-214ENST00000531032 TXNL4BQ9NX01 149 aaKnown RBP8.65□□□□□ -1.02
VPS28-214ENST00000531032 PEF1Q9UBV8 284 aaKnown RBP8.65□□□□□ -1.02
VPS28-214ENST00000531032 RBM7Q9Y580 266 aaKnown RBP8.65□□□□□ -1.02
VPS28-214ENST00000531032 STARD9Q9P2P6 4700 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 LOC100506127A0A0U1RQW1 187 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 MFNGO00587 321 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 SHOXO15266 292 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 RBMXL2O75526 392 aaKnown RBP8.64□□□□□ -1.03
VPS28-214ENST00000531032 SCGNO76038 276 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 OR2A4O95047 310 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 TRBV12-3P01733 135 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 CSN3P07498 182 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 GSTT2P0CG29 244 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 GSTT2BP0CG30 244 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 RRASP10301 218 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 FGF9P31371 208 aaPredicted RBP8.64□□□□□ -1.03
VPS28-214ENST00000531032 CBX3Q13185 183 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 RTL8BQ17RB0 113 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 KCTD21Q4G0X4 260 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 ZFAND6Q6FIF0 208 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 TPRA1Q86W33 373 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 TEX45Q8NA69 505 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 ADAD2Q8NCV1 583 aaKnown RBP8.64□□□□□ -1.03
VPS28-214ENST00000531032 BVESQ8NE79 360 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 MAFIPQ8WZ33 124 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 DDB2Q92466 427 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 GAR1Q9NY12 217 aaKnown RBP8.64□□□□□ -1.03
VPS28-214ENST00000531032 DAPK2Q9UIK4 370 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 ADAM30Q9UKF2 790 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 SACSQ9NZJ4 4579 aa8.64□□□□□ -1.03
VPS28-214ENST00000531032 MSGN1A6NI15 193 aa8.63□□□□□ -1.03
VPS28-214ENST00000531032 RAB27BO00194 218 aa8.63□□□□□ -1.03
VPS28-214ENST00000531032 DUTP33316 252 aaKnown RBP8.63□□□□□ -1.03
VPS28-214ENST00000531032 UBE2KP61086 200 aa8.63□□□□□ -1.03
VPS28-214ENST00000531032 MXD1Q05195 221 aa8.63□□□□□ -1.03
VPS28-214ENST00000531032 PRSS8Q16651 343 aa8.63□□□□□ -1.03
VPS28-214ENST00000531032 HAGHQ16775 308 aa8.63□□□□□ -1.03
VPS28-214ENST00000531032 RPEL1Q2QD12 228 aa8.63□□□□□ -1.03
VPS28-214ENST00000531032 VMA21Q3ZAQ7 101 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms