RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ARL6IP5O75915 188 aa15.78■□□□□ 0.12
TSPAN4-219ENST00000530404 MRPS15P82914 257 aaKnown RBP15.78■□□□□ 0.12
TSPAN4-219ENST00000530404 TMEM177Q53S58 311 aa15.78■□□□□ 0.12
TSPAN4-219ENST00000530404 ZNF343Q6P1L6 599 aa15.78■□□□□ 0.12
TSPAN4-219ENST00000530404 IDO2Q6ZQW0 420 aa15.78■□□□□ 0.12
TSPAN4-219ENST00000530404 OR10J5Q8NHC4 309 aa15.78■□□□□ 0.12
TSPAN4-219ENST00000530404 SPATA25Q9BR10 227 aa15.78■□□□□ 0.12
TSPAN4-219ENST00000530404 VCXQ9H320 206 aa15.78■□□□□ 0.12
TSPAN4-219ENST00000530404 RETNQ9HD89 108 aa15.78■□□□□ 0.12
TSPAN4-219ENST00000530404 V9GY05 133 aa15.78■□□□□ 0.12
TSPAN4-219ENST00000530404 ALMS1Q8TCU4 4167 aa15.77■□□□□ 0.12
TSPAN4-219ENST00000530404 H0Y980 276 aa15.77■□□□□ 0.12
TSPAN4-219ENST00000530404 PRH1P02810 166 aa15.77■□□□□ 0.12
TSPAN4-219ENST00000530404 GNB3P16520 340 aa15.77■□□□□ 0.12
TSPAN4-219ENST00000530404 SERPINB10P48595 397 aa15.77■□□□□ 0.12
TSPAN4-219ENST00000530404 CBX3Q13185 183 aa15.77■□□□□ 0.12
TSPAN4-219ENST00000530404 TNXAQ16473 311 aa15.77■□□□□ 0.12
TSPAN4-219ENST00000530404 RPEL1Q2QD12 228 aa15.77■□□□□ 0.12
TSPAN4-219ENST00000530404 RAB3CQ96E17 227 aa15.77■□□□□ 0.12
TSPAN4-219ENST00000530404 THAP7Q9BT49 309 aaPredicted RBP15.77■□□□□ 0.12
TSPAN4-219ENST00000530404 CCDC90BQ9GZT6 254 aa15.77■□□□□ 0.12
TSPAN4-219ENST00000530404 RBM7Q9Y580 266 aaKnown RBP15.77■□□□□ 0.12
TSPAN4-219ENST00000530404 TRBV6-7A0A0A0MS04 114 aa15.76■□□□□ 0.11
TSPAN4-219ENST00000530404 MSGN1A6NI15 193 aa15.76■□□□□ 0.11
TSPAN4-219ENST00000530404 ANKRD65E5RJM6 399 aa15.76■□□□□ 0.11
TSPAN4-219ENST00000530404 AADACP22760 399 aa15.76■□□□□ 0.11
TSPAN4-219ENST00000530404 MAP2K4P45985 399 aa15.76■□□□□ 0.11
TSPAN4-219ENST00000530404 AQP4P55087 323 aa15.76■□□□□ 0.11
TSPAN4-219ENST00000530404 TRAM1Q15629 374 aa15.76■□□□□ 0.11
TSPAN4-219ENST00000530404 TMEM68Q96MH6 324 aa15.76■□□□□ 0.11
TSPAN4-219ENST00000530404 TUBA4BQ9H853 241 aa15.76■□□□□ 0.11
TSPAN4-219ENST00000530404 NKX1-2Q9UD57 310 aaPredicted RBP15.76■□□□□ 0.11
TSPAN4-219ENST00000530404 RAB22AQ9UL26 194 aa15.76■□□□□ 0.11
TSPAN4-219ENST00000530404 TPRKBQ9Y3C4 175 aa15.76■□□□□ 0.11
TSPAN4-219ENST00000530404 LINC00473A8K010 186 aa15.75■□□□□ 0.11
TSPAN4-219ENST00000530404 J3QRK9 145 aa15.75■□□□□ 0.11
TSPAN4-219ENST00000530404 RGS10O43665 173 aa15.75■□□□□ 0.11
TSPAN4-219ENST00000530404 CRYZL1O95825 349 aa15.75■□□□□ 0.11
TSPAN4-219ENST00000530404 OR10A3P58181 314 aa15.75■□□□□ 0.11
TSPAN4-219ENST00000530404 MLLT11Q13015 90 aaPredicted RBP15.75■□□□□ 0.11
TSPAN4-219ENST00000530404 RTL8BQ17RB0 113 aa15.75■□□□□ 0.11
TSPAN4-219ENST00000530404 LCN12Q6JVE5 192 aa15.75■□□□□ 0.11
TSPAN4-219ENST00000530404 GTSCR1Q86UQ5 136 aa15.75■□□□□ 0.11
TSPAN4-219ENST00000530404 ADAD2Q8NCV1 583 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-219ENST00000530404 ACOT12Q8WYK0 555 aa15.75■□□□□ 0.11
TSPAN4-219ENST00000530404 IGKV1D-8A0A087WSZ0 117 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 A0A0B4J203 849 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 MPPED1O15442 326 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 OR9G9P0C7N8 305 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 TAGLNQ01995 201 aaKnown RBP15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 VMA21Q3ZAQ7 101 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 Q8N402 240 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 OR10R2Q8NGX6 335 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 SRSF12Q8WXF0 261 aaKnown RBP15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 DDB2Q92466 427 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 USMG5Q96IX5 58 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 FAM110AQ9BQ89 295 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 GINS4Q9BRT9 223 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 DUSP21Q9H596 190 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 PLEKHA3Q9HB20 300 aa15.74■□□□□ 0.11
TSPAN4-219ENST00000530404 SHISA3A0PJX4 238 aa15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 MFNGO00587 321 aa15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 BRI3O95415 125 aa15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 PSMA1P25786 263 aaKnown RBP15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 DUTP33316 252 aaKnown RBP15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 ZNF45Q02386 682 aa15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 EXOSC2Q13868 293 aaKnown RBP15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 PRSS8Q16651 343 aa15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 TATDN3Q17R31 274 aa15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 TEX45Q8NA69 505 aa15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 MGLLQ99685 303 aa15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 AKIP1Q9NQ31 210 aa15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 ELF5Q9UKW6 265 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-219ENST00000530404 BMPR1BO00238 502 aa15.72■□□□□ 0.11
TSPAN4-219ENST00000530404 RRASP10301 218 aa15.72■□□□□ 0.11
TSPAN4-219ENST00000530404 EDN2P20800 178 aa15.72■□□□□ 0.11
TSPAN4-219ENST00000530404 UBE2KP61086 200 aa15.72■□□□□ 0.11
TSPAN4-219ENST00000530404 RHOGP84095 191 aa15.72■□□□□ 0.11
TSPAN4-219ENST00000530404 C10orf55Q5SWW7 151 aa15.72■□□□□ 0.11
TSPAN4-219ENST00000530404 NRG4Q8WWG1 115 aa15.72■□□□□ 0.11
TSPAN4-219ENST00000530404 SNAPC3Q92966 411 aa15.72■□□□□ 0.11
TSPAN4-219ENST00000530404 RAB27BO00194 218 aa15.71■□□□□ 0.11
TSPAN4-219ENST00000530404 OR2A4O95047 310 aa15.71■□□□□ 0.11
TSPAN4-219ENST00000530404 IFNA6P05013 189 aa15.71■□□□□ 0.11
TSPAN4-219ENST00000530404 HIST1H1DP16402 221 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-219ENST00000530404 GADD45AP24522 165 aa15.71■□□□□ 0.11
TSPAN4-219ENST00000530404 CD81P60033 236 aa15.71■□□□□ 0.11
TSPAN4-219ENST00000530404 ARFRP1Q13795 201 aa15.71■□□□□ 0.11
TSPAN4-219ENST00000530404 H1FOOQ8IZA3 346 aaPredicted RBP15.71■□□□□ 0.11
TSPAN4-219ENST00000530404 WFDC10AQ9H1F0 79 aa15.71■□□□□ 0.11
TSPAN4-219ENST00000530404 ZNF430Q9H8G1 570 aaPredicted RBP15.71■□□□□ 0.11
TSPAN4-219ENST00000530404 SIGLEC8Q9NYZ4 499 aa15.71■□□□□ 0.11
TSPAN4-219ENST00000530404 SELENOKQ9Y6D0 94 aa15.71■□□□□ 0.11
TSPAN4-219ENST00000530404 SAA1P0DJI8 122 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-219ENST00000530404 MECP2P51608 486 aaKnown RBP15.7■□□□□ 0.1
TSPAN4-219ENST00000530404 SSX1Q16384 188 aa15.7■□□□□ 0.1
TSPAN4-219ENST00000530404 CD300EQ496F6 205 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-219ENST00000530404 OR2B11Q5JQS5 317 aa15.7■□□□□ 0.1
TSPAN4-219ENST00000530404 C19orf35Q6ZS72 473 aa15.7■□□□□ 0.1
TSPAN4-219ENST00000530404 ADTRPQ96IZ2 230 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 309.9 ms