RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 KCTD9Q7L273 389 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 TCTEX1D1Q8N7M0 179 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 ZNF491Q8N8L2 437 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 OR1N2Q8NGR9 330 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 C5orf30Q96GV9 206 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 UBE2E2Q96LR5 201 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 FUNDC2Q9BWH2 189 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 AUNIPQ9H7T9 357 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 GNB4Q9HAV0 340 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 NUBP2Q9Y5Y2 271 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 FCGR3BO75015 233 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 SLC22A5O76082 557 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 IGLV1-40P01703 118 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 HLA-DQB1P01920 261 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 FCGR2CP31995 323 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 CBX5P45973 191 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 TPPP2P59282 170 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 NCS1P62166 190 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 TMEM69Q5SWH9 247 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 HOGA1Q86XE5 327 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 MINDY2Q8NBR6 621 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 OR5T1Q8NG75 326 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 SECTM1Q8WVN6 248 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 TCTEX1D2Q8WW35 142 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 COMMD3Q9UBI1 195 aa11.14□□□□□ -0.63
CAPN1-216ENST00000528739 MRPS7Q9Y2R9 242 aaKnown RBP11.14□□□□□ -0.63
CAPN1-216ENST00000528739 SMIM31A0A1B0GVY4 71 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 LINC00473A8K010 186 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 MPPED1O15442 326 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 XRCC3O43542 346 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 ACTL6BO94805 426 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 IGHV3-11P01762 117 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 EGR2P11161 476 aaPredicted RBP11.13□□□□□ -0.63
CAPN1-216ENST00000528739 FXYD4P59646 89 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 PJVKQ0ZLH3 352 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 TNXAQ16473 311 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 AKIRIN2Q53H80 203 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 TMEM177Q53S58 311 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 PYHIN1Q6K0P9 492 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 IDO2Q6ZQW0 420 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 ACOT12Q8WYK0 555 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 TAS2R8Q9NYW2 309 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 RBMX2Q9Y388 322 aaKnown RBP11.13□□□□□ -0.63
CAPN1-216ENST00000528739 VWFP04275 2813 aa11.13□□□□□ -0.63
CAPN1-216ENST00000528739 IGKV1D-13A0A0B4J2D9 117 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
CAPN1-216ENST00000528739 SEC14L6B5MCN3 397 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 ARPC1BO15143 372 aaKnown RBP11.12□□□□□ -0.63
CAPN1-216ENST00000528739 TNFSF12O43508 249 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 SOX15O60248 233 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 IGLV2-23P01705 113 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 TRGV3P03979 118 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 OR8U8P0C7N1 319 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 APELAP0DMC3 54 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 IGKV1-13P0DP09 117 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 AADACP22760 399 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 ZNF616Q08AN1 781 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 SLC25A46Q96AG3 418 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 ALX4Q9H161 411 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-216ENST00000528739 ZMAT5Q9UDW3 170 aaKnown RBP11.12□□□□□ -0.63
CAPN1-216ENST00000528739 MEGF8Q7Z7M0 2845 aa11.12□□□□□ -0.63
CAPN1-216ENST00000528739 CRIP2P52943 208 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-216ENST00000528739 TAS2R20P59543 309 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 KRTAP10-11P60412 298 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 HERV-K104P61576 105 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 C9orf66Q5T8R8 295 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 MFSD4AQ8N468 514 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 TEX45Q8NA69 505 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 OR5AP2Q8NGF4 316 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 OR13F1Q8NGS4 319 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 OSR1Q8TAX0 266 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-216ENST00000528739 DDB2Q92466 427 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 KCTD12Q96CX2 325 aaKnown RBP11.11□□□□□ -0.63
CAPN1-216ENST00000528739 HSD17B10Q99714 261 aaKnown RBP11.11□□□□□ -0.63
CAPN1-216ENST00000528739 SLC5A7Q9GZV3 580 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 CCL28Q9NRJ3 127 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 COA4Q9NYJ1 87 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 EHFQ9NZC4 300 aa11.11□□□□□ -0.63
CAPN1-216ENST00000528739 C13orf42A0A1B0GVH6 325 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 MSGN1A6NI15 193 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 FAM25AB3EWG3 89 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 FAM25CB3EWG5 89 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 FAM25GB3EWG6 89 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 I3L521 148 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 CREBL2O60519 120 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-216ENST00000528739 PPYP01298 95 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 PRSS3P35030 304 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 RORCP51449 518 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 UBE2KP61086 200 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 RPL30P62888 115 aaKnown RBP11.1□□□□□ -0.63
CAPN1-216ENST00000528739 KIAA0141Q14154 515 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-216ENST00000528739 CDK10Q15131 360 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 GPR107Q5VW38 600 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 TMEM17Q86X19 198 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 OR4S2Q8NH73 311 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 GPHA2Q96T91 129 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 SLA2Q9H6Q3 261 aa11.1□□□□□ -0.63
CAPN1-216ENST00000528739 TRIM64CA6NLI5 447 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 LINC01619G3V211 115 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms